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Updated: Dec 27, 2025

Isolation and Screening from Soil Biodiversity for Fungi Involved in the Degradation of Recalcitrant Materials
Published on: May 16, 2022
Isolation and screening of indigenous bacteria from phosphogypsum-contaminated soils for their potential in promoting
Jihen Jalali1, Pierre Gaudin2, Hervé Capiaux3
1Laboratory of Planetology and Geodynamics of Nantes, UMR 6112 CNRS, Faculty of Sciences and Technology of Nantes, BP 92208, 44322, Nantes Cedex 3, France; Research Unit on Coastal and Urban Environments, University of Sfax, National Engineering School of Sfax, BP 1173, 3038, Sfax, Tunisia; Tunisian Chemical Group, M'Dhilla-Gafsa Factory, B.P. 215, 2100, Gafsa, Tunisia.
Abstract:
Bacteria isolated from soils in the vicinity of phosphogypsum (PG) stockpiles were studied for their potential use in bioaugmentation-assisted phytoextraction. Quick, miniaturized biochemical tests were performed in the presence of metal trace elements (MTE), including rare earth elements (Cd, Sr, Ce, La, Nd and Y), corresponding to their bioavailable concentrations in PG. The intention herein was to assess the capacity of bacteria to: i) grow in PG; ii) produce indole acetic acid and ACC deaminase to promote plant growth and reduce stress; and iii) produce siderophores, including pyoverdine, to mobilize MTE. Results showed that even at maximum PG concentration (10 g/L and pH 3.40), 7 out of 32 isolates were able to grow. The biochemical tests showed differences in the presence or absence of MTE. The presence of MTE seems to promote the production of IAA by a factor of 3.25. On the contrary, it inhibits ACC deaminase and siderophore production, including pyoverdine. According to a scoring method applied, the two most efficient isolates exhibiting maximum metabolite production were identified as Bacillus sp.
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