Related Experiment Video
Updated: Dec 26, 2025

Following in Real Time the Impact of Pneumococcal Virulence Factors in an Acute Mouse Pneumonia Model Using Bioluminescent Bacteria
Published on: February 23, 2014
Humans Are Selectively Exposed to Pneumocystis jirovecii
Ousmane H Cissé1, Liang Ma2, Chao Jiang3
1Critical Care Medicine Department, NIH Clinical Center, Bethesda, Maryland, USA ousmane.cisse@nih.gov jkovacs@nih.gov.
Abstract:
Environmental exposure has a significant impact on human health. While some airborne fungi can cause life-threatening infections, the impact of environment on fungal spore dispersal and transmission is poorly understood. The democratization of shotgun metagenomics allows us to explore important questions about fungal propagation. We focus on Pneumocystis, a genus of host-specific fungi that infect mammals via airborne particles. In humans, Pneumocystis jirovecii causes lethal infections in immunocompromised patients if untreated, although its environmental reservoir and transmission route remain unclear. Here, we attempt to clarify, by analyzing human exposome metagenomic data sets, whether humans are exposed to different Pneumocystis species present in the air but only P. jirovecii cells are able to replicate or whether they are selectively exposed to P. jirovecii Our analysis supports the latter hypothesis, which is consistent with a local transmission model. These data also suggest that healthy carriers are a major driver for the transmission.
Insights
Humans are selectively exposed to airborne Pneumocystis jirovecii, suggesting local transmission. Healthy carriers are identified as key drivers for Pneumocystis transmission.
Area of Science:
- Environmental health
- Mycology
- Genomics
Background:
- Airborne fungal spores significantly impact human health, with some causing severe infections.
- The environmental dispersal and transmission dynamics of fungi, particularly Pneumocystis, are not well understood.
- Pneumocystis jirovecii causes life-threatening pneumonia in immunocompromised individuals, but its environmental origins and transmission pathways remain elusive.
Purpose of the Study:
- To investigate human exposure to airborne Pneumocystis species using metagenomic data.
- To determine if humans are exposed to various Pneumocystis species or selectively to Pneumocystis jirovecii.
- To elucidate the transmission routes and environmental reservoir of Pneumocystis jirovecii.
Main Methods:
- Analysis of human exposome metagenomic datasets.
- Shotgun metagenomics to identify airborne fungal DNA.
- Comparative analysis of Pneumocystis species distribution in environmental and human samples.
Main Results:
- Human exposure is selective for Pneumocystis jirovecii, not a broad exposure to multiple species.
- The findings support a local transmission model for Pneumocystis.
- Data indicate that healthy carriers play a significant role in Pneumocystis transmission.
Conclusions:
- Humans are primarily exposed to airborne Pneumocystis jirovecii, implying specific environmental or host factors.
- Local transmission dynamics are key for Pneumocystis spread.
- Healthy individuals carrying Pneumocystis are crucial for its continued transmission within the population.
Related Concept Videos
Pneumonia I: Introduction
Risk Factors
Various factors influence the likelihood of developing pneumonia. Age plays a crucial role, with infants, children under two, and individuals over 65 at increased risk due to their...
Pneumonia II: Pathophysiology
Transmission-based Precautions II: Airborne and Protective Environment
Airborne precautions:
Use airborne precautions when treating patients known or suspected to have diseases that spread through the air—for example, tuberculosis or measles. These organisms are present in smaller droplets expelled by an infected person and...
Chronic Obstructive Pulmonary Disease
Smoking is a primary risk factor for COPD, with over 80% of patients having a history of it. Patients typically experience progressive dyspnea or labored breathing, frequent coughing, and recurrent pulmonary infections. Many eventually succumb to respiratory failure, characterized by...
Chronic Obstructive Pulmonary Disease-II: Pathophysiology
Chronic Inflammation
Pneumonia V: Nursing management and Prevention
The nurse must practice strict medical asepsis and adhere to infection control guidelines to minimize healthcare-associated infections.
Enhance airway patency
Position the patient correctly to facilitate drainage of the affected lung segments. Manual or mechanical percussion and vibration can also be employed....

