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Related Experiment Video

Updated: Dec 25, 2025

Monitoring Spatial Segregation in Surface Colonizing Microbial Populations
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Interaction-dependent effects of surface structure on microbial spatial self-organization.

Davide Ciccarese1,2, Anita Zuidema1,2, Valeria Merlo1,2

  • 1Department of Environmental Systems Science, ETH Zürich, 8092 Zürich, Switzerland.

Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences
|March 24, 2020
PubMed
Summary
This summary is machine-generated.

Physical objects influence how microbial communities spatially self-organize on surfaces. These objects alter expansion patterns, increasing or decreasing diversity depending on the specific microbial interactions present.

Keywords:
denitrificationmicrobial ecologypattern formationrange expansionself-organizationsurface structure

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Area of Science:

  • Microbial Ecology
  • Systems Biology
  • Spatial Ecology

Background:

  • Microbial communities exhibit spatial self-organization, impacting their function and evolution.
  • The factors driving this spatial organization, particularly the role of physical structures, are not fully understood.

Purpose of the Study:

  • To investigate how physical objects on a surface affect the spatial self-organization of microbial communities.
  • To determine if the presence of physical objects alters the patterns and diversity of microbial range expansions.

Main Methods:

  • Range expansion experiments were conducted using isogenic strains of *Pseudomonas stutzeri*.
  • Experiments were performed both with and without physical objects present on the growth surface.
  • Quantification of spatial self-organization, interspecific boundary densities, and diversity along the expansion frontier.

Main Results:

  • Physical objects induced local deformities at the expansion frontier, which intensified over time.
  • These deformities modulated interspecific boundary densities and diversity, with effects dependent on microbial interactions.
  • Competitive interactions led to increased diversity and boundary density with physical objects, while cross-feeding interactions showed decreased diversity and boundary density.

Conclusions:

  • Physical objects significantly impact microbial spatial self-organization by deforming expansion fronts.
  • The effect of physical objects is contingent on the nature of microbial interactions (e.g., competition vs. cross-feeding).
  • Predicting the influence of physical structures requires knowledge of community interactions and emergent spatial patterns.