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Updated: Dec 25, 2025

Controlled Cortical Impact Model for Traumatic Brain Injury
Published on: August 5, 2014
Chronic Regulation of miR-124-3p in the Perilesional Cortex after Experimental and Human TBI
Niina Vuokila1, Eleonora Aronica2,3, Anatoly Korotkov2
1A. I. Virtanen Institute for Molecular Sciences, University of Eastern Finland, P.O. Box 1627, FI-70211 Kuopio, Finland.
Abstract:
Traumatic brain injury (TBI) dysregulates microRNAs, which are the master regulators of gene expression. Here we investigated the changes in a brain-enriched miR-124-3p, which is known to associate with major post-injury pathologies, such as neuroinflammation. RT-qPCR of the rat tissue sampled at 7 d and 3 months in the perilesional cortex adjacent to the necrotic lesion core (aPeCx) revealed downregulation of miR-124-3p at 7 d (fold-change (FC) 0.13, p < 0.05 compared with control) and 3 months (FC 0.40, p < 0.05) post-TBI. In situ hybridization confirmed the downregulation of miR-124-3p at 7 d and 3 months post-TBI in the aPeCx (both p < 0.01). RT-qPCR confirmed the upregulation of the miR-124-3p target Stat3 in the aPeCx at 7 d post-TBI (7-fold, p < 0.05). mRNA-Seq revealed 312 downregulated and 311 upregulated miR-124 targets (p < 0.05). To investigate whether experimental findings translated to humans, we performed in situ hybridization of miR-124-3p in temporal lobe autopsy samples of TBI patients. Our data revealed downregulation of miR-124-3p in individual neurons of cortical layer III. These findings indicate a persistent downregulation of miR-124-3p in the perilesional cortex that might contribute to post-injury neurodegeneration and inflammation.
Insights
Traumatic brain injury (TBI) causes persistent downregulation of miR-124-3p in the brain. This microRNA dysregulation may contribute to neuroinflammation and neurodegeneration after TBI.
Area of Science:
- Neuroscience
- Molecular Biology
- Genetics
Background:
- MicroRNAs (miRNAs) are key gene regulators, and their dysregulation is implicated in Traumatic Brain Injury (TBI).
- miR-124-3p is a brain-enriched miRNA associated with post-TBI pathologies like neuroinflammation.
Purpose of the Study:
- To investigate the changes in miR-124-3p expression in the perilesional cortex following TBI.
- To identify miR-124-3p targets and assess their relevance in the TBI context.
- To determine if miR-124-3p downregulation in TBI is conserved in human brain tissue.
Main Methods:
- Quantitative reverse transcription PCR (RT-qPCR) to measure miR-124-3p and target gene expression in rat brain tissue.
- In situ hybridization to localize miR-124-3p expression in rat and human brain samples.
- Messenger RNA sequencing (mRNA-Seq) to identify global changes in miR-124-3p targets.
Main Results:
- miR-124-3p was significantly downregulated in the perilesional cortex of rats at 7 days and 3 months post-TBI.
- The miR-124-3p target, Stat3, was upregulated at 7 days post-TBI.
- mRNA-Seq identified hundreds of downregulated and upregulated miR-124-3p targets.
- Human autopsy samples showed reduced miR-124-3p expression in cortical neurons after TBI.
Conclusions:
- TBI induces persistent downregulation of miR-124-3p in the perilesional cortex.
- This miRNA dysregulation may play a role in the neurodegenerative and neuroinflammatory processes following TBI.
- Findings in rats translate to human TBI patients, highlighting miR-124-3p as a potential therapeutic target.
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