Patient clustering using dynamic partitioning on correlated and uncertain biomedical data
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Published on: June 26, 2013
Abdur Rahim Mohammad Forkan1, Ibrahim Khalil2, Heshan Kumarage3
1Swinburne University of Technology, Hawthorn, Victoria, Australia.
Abstract:
Background and objectivesHealth professionals look for specific patterns by correlating multiple physiological data in the process of deciding treatments to remedy clinical abnormalities. Biomedical data exhibit some common patterns in the event of identical clinical illnesses. The primary interest of this work is automatic discovery of such patterns in vital sign data (e.g. heart rate, blood pressure) using unsupervised learning and utilising them to identify patients with similar clinical conditions. MethodsA patient clustering method is developed that efficiently isolates patients into multiple groups by discovering dynamic patterns in multi-dimensional vital sign data. A dynamic partitioning algorithm and a patient clustering approach is proposed by introducing a measure namely aggregated instance-wise uncertainty (AIU) computed from multi-dimensional physiological time-series data. ResultsThe developed model is evaluated qualitatively using principal component analysis and silhouette value; and quantitatively in terms of its ability of clustering patients associated with different clinical situations. Experiments are conducted using real-world biomedical data of patients having various clinical conditions. Thee observed accuracy was 82.85% and 91.17% on two experimental datasets comprised of 35 and 34 patients data respectively.The comparisons show that the proposed approached outperformed than other methods in state-of-the-art approach. ConclusionsThe experimental outcomes demonstrate the effectiveness of the proposed approach in discovering distinct patterns with predictive significance.
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