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Penalized models for analysis of multiple mediators.

Daniel J Schaid1, Jason P Sinnwell1

  • 1Department of Health Sciences Research, Mayo Clinic, Rochester, Minnesota.

Genetic Epidemiology
|April 29, 2020
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Summary

This study introduces a new statistical method for analyzing multiple mediators in research. The approach identifies key mediators, such as DNA methylation, that explain relationships between exposures and outcomes, like childhood trauma and stress.

Keywords:
elastic netgraphical lassoseemingly unrelated regressionsparse group lassostructural equation models

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Area of Science:

  • Statistics
  • Genetics
  • Psychology

Background:

  • Mediation analysis assesses intermediate variables linking exposures to outcomes.
  • Traditional methods often analyze one mediator at a time.
  • Structural equation models (SEMs) can analyze multiple mediators but may not handle complex correlations efficiently.

Purpose of the Study:

  • To develop an advanced statistical method for analyzing multiple mediators simultaneously.
  • To extend the utility of SEMs for mediation analysis using penalized models.
  • To identify significant mediators in complex biological and psychological pathways.

Main Methods:

  • Developed a sparse group lasso penalized model for mediation analysis.
  • The model incorporates parameter groupings and encourages sparsity for mediator selection.
  • Utilized simulations to validate the method's performance and limitations.

Main Results:

  • The novel method effectively evaluates numerous mediators and selects impactful ones.
  • Application identified two novel DNA methylation loci mediating childhood trauma and cortisol stress.
  • The findings highlight specific biological pathways influenced by early life stress.

Conclusions:

  • The proposed sparse group lasso penalized SEM offers a powerful tool for multi-mediator analysis.
  • This approach facilitates the discovery of novel mediators in complex associations.
  • The developed R package 'regmed' makes these advanced methods accessible to researchers.