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Integrin-Linked Kinase Mediates Therapeutic Resistance of Quiescent CML Stem Cells to Tyrosine Kinase Inhibitors
Katharina Rothe1, Artem Babaian1, Naoto Nakamichi1
1Terry Fox Laboratory, BC Cancer, Vancouver, BC V5Z 1L3, Canada; Department of Medical Genetics, University of British Columbia, Vancouver, BC V6T 1Z3, Canada.
Abstract:
Patients with chronic myeloid leukemia (CML) often require lifelong therapy with ABL1 tyrosine kinase inhibitors (TKIs) due to a persisting TKI-resistant population of leukemic stem cells (LSCs). From transcriptome profiling, we show integrin-linked kinase (ILK), a key constituent of focal adhesions, is highly expressed in TKI-nonresponsive patient cells and their LSCs. Genetic and pharmacological inhibition of ILK impaired the survival of nonresponder patient cells, sensitizing them to TKIs, even in the presence of protective niche cells. Furthermore, ILK inhibition eliminated TKI-refractory LSCs from patients, but not normal HSCs, in vitro and in vivo. RNA-sequencing and functional validation studies implicated an important role of ILK in maintaining a requisite level of mitochondrial oxidative metabolism in highly purified, quiescent LSCs. Thus, these findings point to ILK as a critical survival mediator to TKIs and quiescent stem cells, offering an attractive therapeutic target and model for curative combination therapies in stem-cell-driven cancers.
Insights
Integrin-linked kinase (ILK) drives resistance to tyrosine kinase inhibitors (TKIs) in chronic myeloid leukemia (CML) stem cells. Inhibiting ILK sensitizes resistant CML cells to TKIs and eliminates refractory leukemic stem cells.
Area of Science:
- Oncology
- Molecular Biology
- Hematology
Background:
- Chronic myeloid leukemia (CML) necessitates lifelong therapy due to persistent, drug-resistant leukemic stem cells (LSCs).
- Integrin-linked kinase (ILK) is a focal adhesion protein implicated in cell survival and cancer progression.
Purpose of the Study:
- To investigate the role of ILK in TKI resistance and LSC survival in CML.
- To evaluate ILK as a potential therapeutic target for overcoming TKI resistance in CML.
Main Methods:
- Transcriptome profiling of TKI-responsive and nonresponsive CML patient cells.
- Genetic and pharmacological inhibition of ILK.
- In vitro and in vivo assays to assess LSC survival and TKI sensitivity.
- RNA-sequencing and functional validation studies.
Main Results:
- ILK is highly expressed in TKI-nonresponsive CML cells and LSCs.
- ILK inhibition impaired survival of nonresponder cells and sensitized them to TKIs.
- ILK inhibition eradicated TKI-refractory LSCs in vitro and in vivo, sparing normal HSCs.
- ILK regulates mitochondrial oxidative metabolism in quiescent LSCs.
Conclusions:
- ILK is a critical mediator of TKI resistance and survival in CML LSCs.
- Targeting ILK offers a promising strategy for curative combination therapies in CML.
- ILK represents a novel therapeutic target for eradicating stem-cell-driven cancers.
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