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Related Concept Videos

IR Spectroscopy: Hooke's Law Approximation of Molecular Vibration01:16

IR Spectroscopy: Hooke's Law Approximation of Molecular Vibration

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A covalently bonded heteronuclear diatomic molecule can be modeled as two vibrating masses connected by a spring. The vibrational frequency of the bond can be expressed using an equation derived from Hooke's law, which describes how the force applied to stretch or compress a spring is proportional to the displacement of the spring. In this case, the atoms behave like masses, and the bond acts like a spring.
According to Hooke's law, the vibrational frequency is directly proportional to...
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UV–Vis Spectroscopy: Molecular Electronic Transitions01:16

UV–Vis Spectroscopy: Molecular Electronic Transitions

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In Ultraviolet–Visible (UV–Vis) spectroscopy, the absorption of electromagnetic radiation is used to probe the electronic structure of molecules. This technique provides insights into molecular electronic transitions, particularly the movement of electrons between different molecular orbitals. Radiation is absorbed if the energy of the electromagnetic radiation passing through the molecule is precisely equal to the energy difference between the excited and ground states. During this...
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Molecular Spectroscopy: Absorption and Emission01:14

Molecular Spectroscopy: Absorption and Emission

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Molecules possess discrete energy levels called quantum states. Unlike atoms, which have simpler energy levels, molecules possess additional rotational and vibrational energy levels.  Each energy level is separated by an energy gap, with the gaps between adjacent electronic, vibrational, and rotational levels varying significantly. The three types of energy levels in a diatomic molecule are shown in Figure 1.
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IR Spectroscopy: Molecular Vibration Overview01:24

IR Spectroscopy: Molecular Vibration Overview

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When Infrared (IR) radiation passes through a covalently bonded molecule, the bonds transition from lower to higher vibrational levels. The fundamental vibrational motions that result in infrared absorption can be classified as stretching or bending vibrations.
Stretching vibrations are vibrational motions that occur along the bond line, changing the bond length or distance between two bonded atoms. They are further distinguished as symmetric or asymmetric. In symmetric stretching, the...
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Applications of IR Spectroscopy: Overview01:11

Applications of IR Spectroscopy: Overview

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The non-destructive nature and ability to provide valuable chemical information make IR spectroscopy a versatile technique with broad applications in various scientific and industrial fields. IR spectroscopy is commonly used to identify and characterize organic and inorganic compounds. It provides information about the functional groups present in a molecule and the bonding between atoms. This helps in the structural elucidation of compounds during organic synthesis, pharmaceutical research,...
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UV–Vis Spectroscopy: Woodward–Fieser Rules01:29

UV–Vis Spectroscopy: Woodward–Fieser Rules

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UV–Visible absorption spectra of conjugated dienes arise from the lowest energy π → π* transitions. The light-absorbing part of the molecule is called the chromophore, and the substituents directly attached to the chromophore are called auxochromes. A strong correlation exists between the absorption maxima, λmax, and the structure of a conjugated π system. The Woodward–Fieser rules predict the value of λmax for a given structure by adding the...
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Updated: Dec 21, 2025

Vibrational Spectra of a N719-Chromophore/Titania Interface from Empirical-Potential Molecular-Dynamics Simulation, Solvated by a Room Temperature Ionic Liquid
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ReSpect: Relativistic spectroscopy DFT program package.

Michal Repisky1, Stanislav Komorovsky2, Marius Kadek1

  • 1Hylleraas Centre for Quantum Molecular Sciences, Department of Chemistry, UiT The Arctic University of Norway, N-9037 Tromsø, Norway.

The Journal of Chemical Physics
|May 17, 2020
PubMed
Summary
This summary is machine-generated.

The ReSpect program offers computationally efficient relativistic density functional theory (DFT) calculations for molecules and solids. It enables accurate predictions of spectroscopic properties for heavy elements, significantly reducing computational cost compared to non-relativistic methods.

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Proton Transfer and Protein Conformation Dynamics in Photosensitive Proteins by Time-resolved Step-scan Fourier-transform Infrared Spectroscopy
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Area of Science:

  • Computational Chemistry
  • Quantum Chemistry
  • Materials Science

Background:

  • Growing interest in compounds with heavier elements necessitates advanced computational methods.
  • Existing methods struggle to simultaneously address relativistic, spin-polarization, and electron correlation effects efficiently.

Purpose of the Study:

  • Introduce the ReSpect program for efficient relativistic DFT calculations.
  • Detail the theoretical and technical advancements enabling its performance.
  • Demonstrate its capability in predicting molecular and solid-state properties.

Main Methods:

  • Utilizes quasirelativistic two-component (X2C) and fully relativistic four-component (Dirac-Coulomb) DFT.
  • Incorporates Kramers-unrestricted self-consistent field for spin polarization in open-shell systems.
  • Employs efficient algorithms leveraging time-reversal symmetry, biquaternion algebra, and localized Gaussian-type orbitals.

Main Results:

  • ReSpect handles molecules with >100 atoms at the four-component level efficiently on standard CPU clusters.
  • Computational cost is often within a factor of 10 of non-relativistic calculations.
  • Accurate prediction of diverse spectroscopic parameters (EPR, NMR, optical properties) and band structures.

Conclusions:

  • ReSpect provides a computationally feasible approach for studying relativistic effects in heavy-element systems.
  • The program facilitates accurate prediction of a wide range of molecular and solid-state properties.
  • Enables advanced simulations including real-time TDDFT electron dynamics.