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Feature Selection for Microarray Data Classification Using Hybrid Information Gain and a Modified Binary Krill Herd

Ge Zhang1,2, Jincui Hou1, Jianlin Wang1,2

  • 1School of Computer and Information Engineering, Henan University, Kaifeng, China.

Interdisciplinary Sciences, Computational Life Sciences
|May 23, 2020
PubMed
Summary
This summary is machine-generated.

This study introduces IG-MBKH, a new feature selection (FS) strategy for high-dimensional microarray data. It improves classification accuracy and efficiency by combining information gain (IG) with an enhanced binary krill herd (MBKH) algorithm.

Keywords:
Feature selectionInformation gainMicroarray datasetsModified binary krill herd algorithm

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Area of Science:

  • Bioinformatics
  • Computational Biology
  • Machine Learning

Background:

  • Microarray datasets often contain irrelevant or redundant data, hindering accurate pattern identification.
  • High dimensionality in these datasets presents a significant challenge for existing feature selection (FS) algorithms.
  • Effective FS is crucial for identifying relevant attributes and improving model performance.

Purpose of the Study:

  • To propose a novel and effective feature selection strategy for high-dimensional microarray data.
  • To enhance the efficiency and accuracy of feature selection algorithms.
  • To address the limitations of current FS methods in handling complex biological datasets.

Main Methods:

  • Developed the IG-MBKH strategy, integrating Information Gain (IG) for pre-screening and an improved Binary Krill Herd (MBKH) algorithm.
  • Enhanced the MBKH algorithm with a hyperbolic tangent function, adaptive transfer factor, and chaos memory weight factor for improved subset searching.
  • Evaluated the strategy's performance against existing algorithms like BKH and MBKH, and assessed the impact of different classifiers.

Main Results:

  • The IG-MBKH algorithm demonstrated significant improvements in convergence speed.
  • Achieved a reduction in the number of selected features while maintaining or improving classification accuracy.
  • Outperformed BKH, MBKH, and several recent algorithms in feature selection tasks for microarray data.

Conclusions:

  • The proposed IG-MBKH strategy offers a superior approach to feature selection for high-dimensional microarray data.
  • The integration of IG and enhanced MBKH effectively tackles data complexity and improves predictive model performance.
  • The strategy shows promise for various classification tasks in bioinformatics and computational biology.