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Collection and Extraction of Occupational Air Samples for Analysis of Fungal DNA
Published on: May 2, 2018
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Fusarium volatile, a new potential pathogen from a human respiratory sample.
A M S Al-Hatmi1,2,3, M Sandoval-Denis1,4, C Nabet5
1Westerdijk Fungal Biodiversity Institute, P.O. Box 85167, 3508 AD Utrecht, The Netherlands.
Fungal Systematics and Evolution
|May 30, 2020
Summary
A new fungal species, Fusarium volatile, was identified in a French Guiana patient with lung infections. This Fusarium species shows resistance to several common antifungals, requiring further study for treatment strategies.
Area of Science:
- Medical Mycology
- Fungal Taxonomy
- Antimicrobial Resistance
Background:
- Pulmonary infections can be caused by various fungal pathogens.
- Accurate identification and characterization of fungal species are crucial for effective treatment.
- The Fusarium genus includes species with diverse clinical and ecological roles.
Purpose of the Study:
- To isolate and characterize a novel fungal species from a clinical sample.
- To determine the phylogenetic and morphological distinctiveness of the new species.
- To evaluate the antifungal susceptibility profile of the newly described fungus.
Main Methods:
- Isolation of fungus from bronchoalveolar lavage (BAL) sample.
- Phylogenetic analysis using multiple gene loci (cmdA, tef1, rpb2, tub).
- Morphological characterization and antifungal susceptibility testing.
Main Results:
- A new fungal species, Fusarium volatile, was identified and described.
- Phylogenetic analysis placed the new species within the Fusarium fujikuroi species complex, related to the African clade.
- Fusarium volatile exhibited resistance to echinocandins, fluconazole, and itraconazole, with lower minimum inhibitory concentrations (MICs) for amphotericin B, voriconazole, and posaconazole.
Conclusions:
- Fusarium volatile represents a newly identified fungal taxon with potential clinical significance.
- The distinct phylogenetic and morphological characteristics warrant its classification as a new species.
- The observed antifungal resistance profile highlights the need for careful selection of antifungal agents for treating infections caused by this species.
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