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Related Concept Videos

Imaging Biological Samples with Optical Microscopy01:18

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Optical microscopy uses optic principles to provide detailed images of samples. Antonie van Leeuwenhoek designed the first compound optical microscope in the 17th century to visualize blood cells, bacteria, and yeast cells. In 1830, Joseph Jackson Lister created an essentially modern light microscope. The 20th century saw the development of microscopes with enhanced magnification and resolution.
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Updated: Dec 20, 2025

High-Accuracy Correction of 3D Chromatic Shifts in the Age of Super-Resolution Biological Imaging Using Chromagnon
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Simple Shading Correction Method for Brightfield Whole Slide Imaging.

Yoon-Oh Tak1,2, Anjin Park2, Janghoon Choi1,2

  • 1Gwangju Institute of Science and Technology, the School of Mechanical Engineering, Gwangju 61005, Korea.

Sensors (Basel, Switzerland)
|June 4, 2020
PubMed
Summary
This summary is machine-generated.

A new shading correction method improves whole slide imaging (WSI) by reducing black plaid patterns caused by shading distortion and fixed-pattern noise. This robust technique offers better image quality for digital pathology applications.

Keywords:
biomedical image processingbiomedical imagingbrightfield microscopyshading correctionwhole slide imaging

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Area of Science:

  • Digital Pathology
  • Computational Imaging
  • Microscopy

Background:

  • Whole slide imaging (WSI) creates high-resolution digital slides by stitching multiple images.
  • Shading distortion, appearing as black plaid patterns, degrades WSI quality.
  • Fixed-pattern noise also impacts image uniformity under consistent illumination.

Purpose of the Study:

  • To present a simple yet robust shading correction method for brightfield WSI.
  • To address artifacts from dust, bubbles, and fixed-pattern noise.
  • To improve the visual quality of digital pathology images.

Main Methods:

  • A two-step approach to model shading distortion from image sequences.
  • Construction of candidate shading distortion models.
  • Selection of the optimal model for correction.

Main Results:

  • The proposed method achieved superior correction scores compared to CIDRE (0.39 ± 0.099 vs. 0.67 ± 0.047) and BaSiC (0.39 ± 0.099 vs. 0.55 ± 0.038).
  • Demonstrated effectiveness in correcting both shading distortion and fixed-pattern noise.
  • Outperformed state-of-the-art methods without imposing smooth operations or constraints during distortion estimation.

Conclusions:

  • The proposed method offers a significant improvement in shading correction for WSI.
  • It effectively corrects shading distortion and fixed-pattern noise, enhancing image fidelity.
  • This technique provides a valuable tool for digital pathology and biomedical imaging research.