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Genome-wide CRISPR synthetic lethality screen identifies a role for the ADP-ribosyltransferase PARP14 in DNA
Ashna Dhoonmoon1, Emily M Schleicher1, Kristen E Clements1
1Department of Biochemistry and Molecular Biology, The Pennsylvania State University College of Medicine, Hershey, PA 17033, USA.
Abstract:
The DNA damage response is essential to maintain genomic stability, suppress replication stress, and protect against carcinogenesis. The ATR-CHK1 pathway is an essential component of this response, which regulates cell cycle progression in the face of replication stress. PARP14 is an ADP-ribosyltransferase with multiple roles in transcription, signaling, and DNA repair. To understand the biological functions of PARP14, we catalogued the genetic components that impact cellular viability upon loss of PARP14 by performing an unbiased, comprehensive, genome-wide CRISPR knockout genetic screen in PARP14-deficient cells. We uncovered the ATR-CHK1 pathway as essential for viability of PARP14-deficient cells, and identified regulation of DNA replication dynamics as an important mechanistic contributor to the synthetic lethality observed. Our work shows that PARP14 is an important modulator of the response to ATR-CHK1 pathway inhibitors.
Insights
Poly (ADP-ribose) polymerase 14 (PARP14) deficiency necessitates the ATR-CHK1 pathway for cell survival. This study reveals PARP14
Area of Science:
- Molecular Biology
- Genetics
- Cell Biology
Background:
- The DNA damage response (DDR) is crucial for maintaining genomic stability and preventing cancer.
- The ATR-CHK1 pathway is a key regulator of cell cycle progression during replication stress.
- Poly (ADP-ribose) polymerase 14 (PARP14) is involved in transcription, signaling, and DNA repair.
Purpose of the Study:
- To identify genetic factors influencing cell viability in the absence of PARP14.
- To elucidate the functional relationship between PARP14 and the ATR-CHK1 pathway.
- To understand the role of PARP14 in regulating DNA replication dynamics.
Main Methods:
- Genome-wide CRISPR knockout genetic screen in PARP14-deficient cells.
- Analysis of cellular viability upon gene depletion.
- Investigation of DNA replication dynamics.
Main Results:
- The ATR-CHK1 pathway was found to be essential for the viability of PARP14-deficient cells.
- Regulation of DNA replication dynamics contributes to synthetic lethality in PARP14-deficient cells.
- PARP14 modulates cellular responses to ATR-CHK1 pathway inhibitors.
Conclusions:
- PARP14 plays a significant role in the DNA damage response and genomic stability.
- The ATR-CHK1 pathway is synthetically lethal with PARP14 loss, highlighting a potential therapeutic vulnerability.
- PARP14 is a critical modulator of responses to ATR-CHK1 pathway inhibitors, suggesting its involvement in cancer therapy.
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