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Isolation of Fidelity Variants of RNA Viruses and Characterization of Virus Mutation Frequency
Published on: June 16, 2011
CCR5-Δ32 gene variant frequency in the Turkish Cypriot population
Umut Fahrioglu1,2, Mahmut Cerkez Ergoren3,4, Gamze Mocan3,5
1Department of Medical Biology, Faculty of Medicine, Near East University, 99138, Nicosia, Cyprus. umut.fahrioglu@neu.edu.tr.
Insights
The CCR5-Δ32 gene variant, offering resistance to certain HIV-1 infections, was found in 3% of the Turkish Cypriot population. This finding highlights the need for targeted HIV screening programs.
Area of Science:
- Genetics
- Immunology
- Epidemiology
Background:
- Global HIV-1 infections remain a significant public health concern, with millions newly infected annually.
- HIV-1 entry into host cells depends on CD4 receptors and chemokine co-receptors, notably CCR5.
- The CCR5-Δ32 allele confers resistance to M-tropic HIV-1 strains, making its population frequency a key factor in understanding transmission dynamics.
Purpose of the Study:
- To determine the frequency of the CCR5-Δ32 allele in the Turkish Cypriot population.
- To assess the potential implications of this allele frequency for HIV-1 susceptibility and screening strategies within the region.
Main Methods:
- Genotyping of 326 Turkish Cypriots (141 males, 185 females) for the CCR5 gene.
- Amplification of the CCR5 gene region containing the Δ32 deletion using specific primers.
- Calculation of the CCR5-Δ32 allele frequency based on observed genotypes.
Main Results:
- The CCR5-Δ32 allele frequency was found to be 3% in the studied Turkish Cypriot population.
- The Δ32 allele was exclusively observed in heterozygous individuals.
- No homozygous individuals for the CCR5-Δ32 allele were identified.
Conclusions:
- The 3% frequency of the CCR5-Δ32 allele in Turkish Cypriots suggests a partial genetic resistance to M-tropic HIV-1.
- This data can inform public health strategies, including the development of more effective HIV screening and prevention programs.
- Further research and dialogue among healthcare professionals, policymakers, and the public are crucial for controlling and potentially eliminating HIV in the region.
Abstract:
Recent UNAIDS reports (December 2019) indicate that 37.9 million people have been affected by HIV infection around the globe in 2018, of which 1.7 million are cited as new infections. Human immunodeficiency virus-1 (HIV-1) requires both the CD4 receptor, as the primary receptor, and a chemokine co-receptor to gain entry into the cell. In addition to the WT allele for C-C motif chemokine receptor 5 (CCR5-wt), there is another allele with a 32 bp deletion in the protein coding region (CCR5-Δ32). Individuals who are homozygous for the mutant allele are resistant towards M-tropic HIV infections. In the current study, we aimed to determine the CCR5-Δ32 allele frequency in the Turkish Cypriot population with 326 subjects, 141 men (43.1%) and 185 (56.9%) women. The region of the CCR5 gene containing the Δ32 deletion was amplified using flanking primers. The CCR5 gene Δ32 allele frequency was calculated at 3% and only observed in heterozygous individuals. We hope that our current publication could be a point of dialog between the physicians, the government officials and the public set up a more modern and well-structured HIV screening program in an effort to control and hopefully eliminate HIV from the Turkish Cypriot population.
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