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Workflow and Tools for Crystallographic Fragment Screening at the Helmholtz-Zentrum Berlin
Published on: March 3, 2021
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FragMAX: the fragment-screening platform at the MAX IV Laboratory
Gustavo M A Lima1, Vladimir O Talibov1, Elmir Jagudin1
1BioMAX, MAX IV Laboratory, Fotongatan 2, 224 84 Lund, Sweden.
Acta Crystallographica. Section D, Structural Biology
|August 4, 2020
Summary
FragMAX is a new platform that streamlines X-ray fragment screening at MAX IV Laboratory. It supports researchers in analyzing large datasets and refining protein-fragment complex structures.
Area of Science:
- Structural Biology
- Biochemistry
- Medicinal Chemistry
Background:
- High-throughput data collection at synchrotron facilities enables massive projects like in-crystal fragment screening.
- Large-scale facilities provide crucial support for structural biology research.
- Fragment screening requires efficient project management and computational power for data analysis and structure refinement.
Purpose of the Study:
- To introduce FragMAX, a comprehensive platform for fragment screening at the BioMAX beamline of MAX IV Laboratory.
- To describe how users are supported in X-ray-based fragment screenings.
- To detail the optimal exploitation of a fourth-generation storage ring for fragment screening.
Main Methods:
- Development and implementation of the FragMAX platform.
- Utilizing advanced synchrotron storage rings and beamline automation.
- Employing computational power for data processing and structure refinement.
Main Results:
- FragMAX facilitates efficient project management for fragment screening.
- The platform assists users in analyzing multiple datasets and identifying protein-fragment complexes.
- Optimized workflows leverage the capabilities of the MAX IV Laboratory's fourth-generation storage ring.
Conclusions:
- FragMAX enhances the accessibility and efficiency of X-ray-based fragment screening.
- The platform empowers research groups to integrate structural biology into their drug discovery efforts.
- Effective utilization of advanced synchrotron facilities is crucial for large-scale structural biology projects.