Genome-wide RNA interference screening reveals a COPI-MAP2K3 pathway required for YAP regulation
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Updated: Dec 13, 2025

Identification of Transcription Factor Regulators using Medium-Throughput Screening of Arrayed Libraries and a Dual-Luciferase-Based Reporter
Published on: March 27, 2020
Yong Joon Kim1,2, Eunji Jung1, Eunbie Shin1
1Graduate School of Medical Science and Engineering, Korea Advanced Institute of Science and Technology, 34141 Daejeon, Korea.
Abstract:
The transcriptional regulator YAP, which plays important roles in the development, regeneration, and tumorigenesis, is activated when released from inhibition by the Hippo kinase cascade. The regulatory mechanism of YAP in Hippo-low contexts is poorly understood. Here, we performed a genome-wide RNA interference screen to identify genes whose loss of function in a Hippo-null background affects YAP activity. We discovered that the coatomer protein complex I (COPI) is required for YAP nuclear enrichment and that COPI dependency of YAP confers an intrinsic vulnerability to COPI disruption in YAP-driven cancer cells. We identified MAP2K3 as a YAP regulator involved in inhibitory YAP phosphorylation induced by COPI subunit depletion. The endoplasmic reticulum stress response pathway activated by COPI malfunction appears to connect COPI and MAP2K3. In addition, we provide evidence that YAP inhibition by COPI disruption may contribute to transcriptional up-regulation of PTGS2 and proinflammatory cytokines. Our study offers a resource for investigating Hippo-independent YAP regulation as a therapeutic target for cancers and suggests a link between YAP and COPI-associated inflammatory diseases.
Insights
The coatomer protein complex I (COPI) regulates YAP protein activity in cancer cells. Disrupting COPI can be a therapeutic strategy for YAP-driven cancers, potentially impacting inflammation.
Area of Science:
- Cell Biology
- Molecular Oncology
- Signal Transduction
Background:
- The transcriptional regulator YAP is crucial in development, regeneration, and tumorigenesis, typically regulated by the Hippo kinase cascade.
- Mechanisms controlling YAP activity in low-Hippo contexts remain largely unknown, representing a significant gap in understanding cancer biology.
Purpose of the Study:
- To identify novel regulators of YAP activity in a Hippo-null background using a genome-wide screen.
- To investigate the role of the coatomer protein complex I (COPI) in YAP regulation and its therapeutic implications in cancer.
Main Methods:
- Genome-wide RNA interference (RNAi) screen in a Hippo-null cell model.
- Analysis of YAP nuclear localization and activity.
- Investigating the link between COPI, MAP2K3, endoplasmic reticulum stress, and YAP phosphorylation.
Main Results:
- COPI is essential for YAP nuclear enrichment, revealing a dependency that sensitizes YAP-driven cancer cells to COPI disruption.
- MAP2K3 was identified as a key mediator of YAP inhibitory phosphorylation upon COPI subunit depletion.
- COPI malfunction triggers endoplasmic reticulum stress, linking COPI and MAP2K3 pathways.
Conclusions:
- COPI acts as a critical regulator of YAP activity independently of the Hippo pathway.
- Disruption of COPI presents a potential therapeutic vulnerability in YAP-driven cancers.
- YAP regulation by COPI may influence inflammatory responses, suggesting links to COPI-associated inflammatory diseases.
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