Related Experiment Video
Updated: Dec 12, 2025

Author Spotlight: Unveiling Transmembrane Protein Family-Related Markers in Gastric Cancer and Implications for Targeted Therapies
Published on: September 15, 2023
S-Adenosylmethionine Treatment of Colorectal Cancer Cell Lines Alters DNA Methylation, DNA Repair and Tumor
Sára Zsigrai1, Alexandra Kalmár1,2, Zsófia B Nagy1
1Department of Internal Medicine and Oncology, Semmelweis University, 1083 Budapest, Hungary.
Abstract:
Global DNA hypomethylation is a characteristic feature of colorectal carcinoma (CRC). The tumor inhibitory effect of S-adenosylmethionine (SAM) methyl donor has been described in certain cancers including CRC. However, the molecular impact of SAM treatment on CRC cell lines with distinct genetic features has not been evaluated comprehensively. HT-29 and SW480 cells were treated with 0.5 and 1 mmol/L SAM for 48 h followed by cell proliferation measurements, whole-genome transcriptome and methylome analyses, DNA stability assessments and exome sequencing. SAM reduced cell number and increased senescence by causing S phase arrest, besides, multiple EMT-related genes (e.g., TGFB1) were downregulated in both cell lines. Alteration in the global DNA methylation level was not observed, but certain methylation changes in gene promoters were detected. SAM-induced γ-H2AX elevation could be associated with activated DNA repair pathway showing upregulated gene expression (e.g., HUS1). Remarkable genomic stability elevation, namely, decreased micronucleus number and comet tail length was observed only in SW480 after treatment. SAM has the potential to induce senescence, DNA repair, genome stability and to reduce CRC progression. However, the different therapeutic responses of HT-29 and SW480 to SAM emphasize the importance of the molecular characterization of CRC cases prior to methyl donor supplementation.
Insights
S-adenosylmethionine (SAM) may reduce colorectal cancer (CRC) progression by inducing senescence and DNA repair. However, responses vary between CRC cell lines, highlighting the need for molecular profiling before SAM treatment.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Global DNA hypomethylation is a hallmark of colorectal carcinoma (CRC).
- S-adenosylmethionine (SAM), a methyl donor, shows tumor-inhibitory effects in some cancers, including CRC.
- The precise molecular effects of SAM on diverse CRC cell lines remain incompletely understood.
Purpose of the Study:
- To comprehensively evaluate the molecular impact of SAM treatment on colorectal carcinoma cell lines with distinct genetic profiles.
- To investigate SAM's effects on cell proliferation, gene expression, DNA methylation, and genomic stability.
Main Methods:
- Treatment of HT-29 and SW480 CRC cell lines with SAM (0.5 and 1 mmol/L for 48 h).
- Assessment of cell proliferation, senescence, cell cycle arrest (S phase).
- Whole-genome transcriptome and methylome analyses, DNA stability assays (γ-H2AX, micronucleus, comet assay), and exome sequencing.
Main Results:
- SAM reduced cell number and increased senescence via S phase arrest in both cell lines.
- Downregulation of epithelial-mesenchymal transition (EMT)-related genes (e.g., TGFB1) observed.
- Global DNA methylation levels were unchanged, but specific gene promoter methylation alterations occurred.
- SAM elevated γ-H2AX, suggesting DNA repair pathway activation (e.g., HUS1 upregulation).
- Enhanced genomic stability (decreased micronucleus, comet tail length) was noted exclusively in SW480 cells.
Conclusions:
- SAM demonstrates potential in reducing CRC progression by inducing senescence, DNA repair, and improving genome stability.
- Differential responses between HT-29 and SW480 cell lines underscore the necessity of molecular characterization for personalized methyl donor therapy in CRC.
Related Concept Videos
Phase II Reactions: Methylation Reactions
The mechanism of methylation unfolds in two stages. The first stage sees a methyltransferase enzyme facilitating the transfer of a methyl group from S-adenosylmethionine (SAM) to the substrate, forming S-adenosylhomocysteine (SAH). The second stage involves further metabolism of SAH into homocysteine, which can be recycled...
Tumor Progression
Colon cancer is one of the best-documented examples of tumor progression. Early mutation in the APC gene in colon cells causes a small growth on the colon wall called a polyp. With time, this polyp grows into a benign, pre-cancerous tumor. Further...
Abnormal Proliferation
Epigenetic Regulation
X-chromosome...

