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Updated: Dec 12, 2025

Monitoring Conformational Dynamics of Single Unmodified Proteins using Plasmonic Nanotweezers
Published on: March 21, 2025
Observing dynamic molecular changes at single-molecule level in a cucurbituril based plasmonic molecular junction
Qiushuang Ai1, Jianghao Zhou2, Jing Guo3
1The State Key Laboratory of Refractories and Metallurgy, Wuhan University of Science and Technology, Wuhan, Hubei, 430081, China. schang23@wust.edu.cn feng_liang@whu.edu.cn and School of Chemistry and Chemical Engineering, Wuhan University of Science and Technology, Wuhan, Hubei, 430081, China and Department of Physics, Florida International University, Miami, Florida, 33199, USA. jinhe@fiu.edu.
Abstract:
In recent years, surface enhanced Raman spectroscopy (SERS) has emerged as a prominent tool for probing molecular interaction and reaction with single-molecule sensitivity. Here we use SERS to investigate the dynamic changes of the cucurbit[7]uril (CB[7]) based plasmonic molecular junctions in solution, which are spontaneously formed by the adsorption of gold nanoparticles (GNPs) at the CB[7] modified gold nanoelectrode (GNE) surface. The typical fingerprint Raman peaks of CB[7] are very weak in the SERS spectra. However, chemically enhanced peaks are prominent in the spectra due to the charge transfer across the metal-molecule interface through specific noncovalent interactions between the gold atoms and CB[7] or its guest molecule. We first investigated the selectively enhanced and greatly shifted C[double bond, length as m-dash]O peak of CB[7] in the SERS spectra. Based on the bias-dependent changes of the C[double bond, length as m-dash]O peak, we found the gold-carbonyl interaction was strengthened by the positive bias applied to the GNE, resulting in stable CB[7] junctions. Next, we found the CB[7] junction could also be stabilized by the inclusion of a guest molecule amino-ferrocene, attributed to the interactions between gold adatoms and the cyclopentadienyl ring of the guest molecule. Because this interaction is sensitive to the orientation of the guest molecule in the cavity, we revealed the rotational motion of a guest molecule inside the CB[7] cavity based on the dynamic spectral changes of the cyclopentadienyl ring peak.
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