Involvement of hpap2 and dgkA Genes in Colistin Resistance Mediated by mcr Determinants
Alejandro Gallardo1, María Ugarte-Ruiz2, Marta Hernández3
1Departamento de Bioquímica, Facultad de Veterinaria, Universidad de Extremadura, Av. de la Universidad s/n, 10003 Cáceres, Spain.
Abstract:
Plasmid-mediated colistin resistance (mcr) determinants are challenging the efficacy of polymyxins against Gram-negative pathogens. Among 10 mcr genes described so far, the major determinants mcr-1 and mcr-3 are found closely linked to hpap2 or dgkA genes, encoding a hypothetical phosphatidic acid phosphatase of type 2 (PAP2) and a diacylglycerol kinase, respectively, whose functions are still unknown. In this study, mcr-1, mcr-1-hpap2, mcr-3, and mcr-3-dgkA were expressed in Escherichia coli, and recombinant strains were analyzed to detect antimicrobial susceptibility and changes in the expression of genes involved in phospholipid metabolism. The mcr-1 or mcr-3 single genes were enough to drive growth on colistin selective media, although co-expression of linked genes conferred maximal antibiotic resistance. Expression of mcr determinants downregulated endogenous genes involved in lipopolysaccharide (LPS) modification or phospholipid recycling, although to different extents of repression: strong for arnB, ybjG, and pmrR; medium for eptA, lpxT, and dgkA; small for bacA and pgpB. Four of these genes (bacA, lpxT, pgpB, and ybjG) encode undecaprenyl pyrophosphate (UPP) phosphatases. In these conditions, cells presented resistance against bacitracin, an antibiotic that sequesters UPP from PAP2 enzymes. The hpap2 and dgkA genes might play a role in colistin resistance by compensating for phospholipid metabolism functions altered during LPS modification by colistin resistance determinants.
Insights
Plasmid-mediated colistin resistance genes (mcr) challenge antibiotic efficacy. Co-expression of mcr with linked hpap2 or dgkA genes enhances resistance by altering phospholipid metabolism in Gram-negative bacteria.
Area of Science:
- Microbiology
- Molecular Biology
- Antimicrobial Resistance
Background:
- Plasmid-mediated colistin resistance (mcr) genes compromise polymyxin effectiveness against Gram-negative pathogens.
- Key mcr genes, mcr-1 and mcr-3, are often linked to hpap2 and dgkA, respectively, whose functions remain unclear.
- Understanding the interplay between mcr genes and host cell metabolism is crucial for combating antibiotic resistance.
Purpose of the Study:
- To investigate the role of mcr-1 and mcr-3, individually and co-expressed with hpap2 or dgkA, in colistin resistance.
- To analyze the impact of mcr expression on genes involved in phospholipid metabolism and lipopolysaccharide modification.
- To elucidate the contribution of hpap2 and dgkA to colistin resistance mechanisms.
Main Methods:
- Expression of mcr-1, mcr-3, mcr-1-hpap2, and mcr-3-dgkA in Escherichia coli.
- Antimicrobial susceptibility testing of recombinant strains.
- Quantitative analysis of gene expression related to phospholipid metabolism and LPS modification.
Main Results:
- Single mcr-1 or mcr-3 genes conferred growth on colistin selective media; co-expression with hpap2 or dgkA resulted in maximal resistance.
- mcr expression downregulated genes involved in LPS modification and phospholipid recycling, including arnB, ybjG, pmrR, eptA, lpxT, dgkA, bacA, and pgpB.
- Cells expressing mcr determinants showed resistance to bacitracin, indicating altered undecaprenyl pyrophosphate (UPP) metabolism.
Conclusions:
- mcr-1 and mcr-3 alone are sufficient for colistin resistance, but linked genes enhance this phenotype.
- mcr determinants modulate host phospholipid metabolism, impacting LPS modification and UPP homeostasis.
- hpap2 and dgkA likely contribute to colistin resistance by compensating for altered phospholipid metabolism.
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