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Screening for Amyloid Aggregation by Semi-Denaturing Detergent-Agarose Gel Electrophoresis
Published on: July 16, 2008
Mutations Outside the Ure2 Amyloid-Forming Region Disrupt [URE3] Prion Propagation and Alter Interactions with
Shailesh Kumar1, Elliot A Dine1, Ethan Paddock1
1Laboratory of Biochemistry and Genetics, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, Maryland, USA.
Abstract:
The yeast prion [URE3] propagates as a misfolded amyloid form of the Ure2 protein. Propagation of amyloid-based yeast prions requires protein quality control (PQC) factors, and altering PQC abundance or activity can cure cells of prions. Yeast antiprion systems composed of PQC factors act at normal abundance to restrict establishment of the majority of prion variants that arise de novo While these systems are well described, how they or other PQC factors interact with prion proteins remains unclear. To gain insight into such interactions, we identified mutations outside the Ure2 prion-determining region that destabilize [URE3]. Despite residing in the functional domain, 16 of 17 mutants retained Ure2 activity. Four characterized mutations caused rapid loss of [URE3] yet allowed [URE3] to propagate under prion-selecting conditions. Two sensitized [URE3] to Btn2, Cur1, and Hsp42, but in different ways. Two others reduced amyloid formation in vitro Of these, one impaired prion replication and the other apparently impaired transmission. Thus, widely dispersed sites outside a prion's amyloid-forming region can contribute to prion character, and altering such sites can disrupt prion propagation by altering interactions with PQC factors.
Insights
Altering yeast Ure2 protein outside its prion region can disrupt [URE3] prion propagation. These changes affect interactions with protein quality control factors, offering new strategies for prion curing.
Area of Science:
- Molecular biology
- Yeast genetics
- Prion biology
Background:
- Yeast prions, like [URE3] formed by Ure2 protein, propagate as amyloids.
- Protein quality control (PQC) factors are essential for prion propagation and can be targeted for prion curing.
- The precise interactions between PQC factors and prion proteins are not fully understood.
Purpose of the Study:
- To investigate how mutations outside the Ure2 prion-determining region affect [URE3] prion stability and propagation.
- To explore the role of non-amyloid forming regions of Ure2 in interactions with protein quality control factors.
Main Methods:
- Generated and characterized mutations in the Ure2 protein outside its prion-forming region.
- Assessed the impact of mutations on [URE3] prion loss, propagation, and sensitivity to PQC factors (Btn2, Cur1, Hsp42).
- Evaluated in vitro amyloid formation and prion replication/transmission for specific mutants.
Main Results:
- Most Ure2 mutants outside the prion region retained protein activity.
- Four mutants rapidly lost [URE3] but could re-propagate it under selective conditions.
- Mutations differentially affected sensitivity to specific PQC factors and in vitro amyloid formation, impacting prion replication or transmission.
Conclusions:
- Dispersed sites outside the amyloid-forming region of Ure2 significantly influence prion character.
- Modifying these sites can disrupt prion propagation by altering interactions with PQC systems.
- This highlights potential new therapeutic targets for prion diseases by modulating protein interactions.
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