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Updated: Dec 10, 2025

Isolation and Identification of Waterborne Antibiotic-Resistant Bacteria and Molecular Characterization of their Antibiotic Resistance Genes
Published on: March 3, 2023
Antimicrobial Resistance Gene Detection and Plasmid Typing Among Multidrug Resistant Enterococci Isolated from
Sohyun Cho1, John B Barrett1, Jonathan G Frye1
1Bacterial Epidemiology and Antimicrobial Resistance Research Unit, United States Department of Agriculture, Agricultural Research Service, U.S. National Poultry Research Center, Athens, GA 30605, USA.
This study investigated antimicrobial resistance (AR) genes and plasmids in multidrug-resistant enterococci from Georgia surface water. Environmental enterococci harbor diverse AR genes and unique plasmids, expanding our understanding of resistance reservoirs.
Area of Science:
- Environmental microbiology
- Molecular biology
- Public health
Background:
- Enterococci are opportunistic pathogens, and their multidrug resistance (MDR) is a growing public health concern.
- Environmental reservoirs, such as surface water, can harbor and disseminate antimicrobial resistance (AR) genes.
- Understanding the AR mechanisms and plasmid diversity in environmental enterococci is crucial for assessing potential risks.
Purpose of the Study:
- To determine the mechanisms of antimicrobial resistance (AR) and the abundance and diversity of plasmids in multidrug-resistant (MDR) enterococci from surface water.
- To identify specific AR genes and plasmid replicon families present in these environmental isolates.
- To compare AR gene profiles and plasmid types with those found in human and animal-associated enterococci.
Main Methods:
- Screening of 51 enterococci isolates for 27 AR genes conferring resistance to common antibiotics.
- Utilizing a plasmid classification system based on replication genes to identify Gram-positive plasmid replicon families.
- Molecular detection of specific AR genes, including erm(B), erm(C), aph(3')-IIIa, ant(6)-Ia, lnu(B), vat(E), qnr, and various tet genes.
Main Results:
- Twelve AR genes conferring resistance to erythromycin, tylosin, kanamycin, streptomycin, lincomycin, Q/D, ciprofloxacin, and tetracycline were identified.
- Twelve distinct plasmid replicon families (rep-families) were detected in two-thirds of the isolates.
- While common AR genes were found, many isolates had undetermined resistance genes, suggesting novel AR mechanisms in environmental enterococci.
Conclusions:
- Environmental enterococci possess diverse AR mechanisms and plasmid types, some distinct from those found in clinical or animal settings.
- Surface water acts as a reservoir for AR genes and plasmids, contributing to the broader landscape of antimicrobial resistance.
- Further research is needed to fully elucidate the AR mechanisms present in environmental enterococci and their potential for dissemination.
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