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Updated: Dec 7, 2025

Live Imaging and Quantification of Viral Infection in K18 hACE2 Transgenic Mice Using Reporter-Expressing Recombinant SARS-CoV-2
Published on: November 5, 2021
Insights
The severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) caused the COVID-19 pandemic. Analysis of the SARS-CoV-2 genome suggests a natural evolutionary origin from bat and pangolin coronaviruses, not a recombinant virus.
Area of Science:
- Virology
- Genomics
Background:
- The COVID-19 pandemic, caused by SARS-CoV-2, emerged in late 2019.
- SARS-CoV-2 is a novel coronavirus responsible for a severe, deadly pneumonia.
Purpose of the Study:
- To investigate the origin and genomic characteristics of SARS-CoV-2.
- To understand the evolutionary pathways leading to the emergence of SARS-CoV-2.
Main Methods:
- Genomic analysis of the SARS-CoV-2.
- Comparative analysis of SARS-CoV-2 genome with other coronaviruses, including bat and pangolin strains.
Main Results:
- SARS-CoV-2 possesses unique features in its S protein, including the receptor binding domain (RBD) and a furin-like cleavage site.
- Genomic analysis suggests a natural evolutionary origin, potentially involving recombination between bat and pangolin coronaviruses.
- Recent analyses indicate SARS-CoV-2 is not a recombinant virus.
Conclusions:
- The specific genomic features of SARS-CoV-2, particularly in the S gene, are crucial for its pathogenicity.
- The origin of SARS-CoV-2 is likely zoonotic, resulting from natural evolution and interspecies transmission.
- Further research is needed to fully elucidate the evolutionary trajectory of SARS-CoV-2.
Abstract:
A novel disease, of unknown origin, causing a deadly pneumonia of human patients was reported in December 2019 in Wuhan, Hubei province of China. Later called coronavirus disease (COVID-19), it rapidly spread across China and worldwide. Intensive research revealed that the etiological agent of the global COVID-19 pandemic was a novel coronavirus named severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). The SARS-CoV-2 genome contains typical coronavirus genes but the receptor binding domain (RBD) in the S protein is highly specific. The site for furin-like protease cleavage of the S protein into S1 and S2 subunits is also unique. Further analyses suggested that SARS-CoV-2 is of zoonotic origin. The analysis of the SARS-CoV-2 genome, especially the S gene, shows that natural evolutionary process between a bat-CoV and a pangolin-CoV or other animal coronavirus could have been important in creating SARS-CoV-2, with transmission of novel virus to the human population. On the other hand, new analyses indicate that SARS-CoV-2 is not a recombinant virus. Keywords: COVID-19; SARS-CoV-2; genome; bat coronavirus; pangolin coronavirus.
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