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Updated: Dec 7, 2025

Isolation of mRNAs Associated with Yeast Mitochondria to Study Mechanisms of Localized Translation
Published on: March 14, 2014
Mitochondrial RNA granules are fluid condensates positioned by membrane dynamics
Timo Rey1, Sofia Zaganelli2,3, Emilie Cuillery
1Laboratory of Experimental Biophysics, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland. timo.rey@epfl.ch.
Abstract:
Mitochondria contain the genetic information and expression machinery to produce essential respiratory chain proteins. Within the mitochondrial matrix, newly synthesized RNA, RNA processing proteins and mitoribosome assembly factors form punctate sub-compartments referred to as mitochondrial RNA granules (MRGs)1-3. Despite their proposed importance in regulating gene expression, the structural and dynamic properties of MRGs remain largely unknown. We investigated the internal architecture of MRGs using fluorescence super-resolution localization microscopy and correlative electron microscopy, and found that the MRG ultrastructure consists of compacted RNA embedded within a protein cloud. Using live-cell super-resolution structured illumination microscopy and fluorescence recovery after photobleaching, we reveal that MRGs rapidly exchange components and can undergo fusion, characteristic properties of fluid condensates4. Furthermore, MRGs associate with the inner mitochondrial membrane and their fusion coincides with mitochondrial remodelling. Inhibition of mitochondrial fission or fusion leads to an aberrant accumulation of MRGs into concentrated pockets, where they remain as distinct individual units despite their close apposition. Together, our findings reveal that MRGs are nanoscale fluid compartments, which are dispersed along mitochondria via membrane dynamics.
Insights
Mitochondrial RNA granules (MRGs) are fluid compartments within mitochondria. These dynamic structures, crucial for gene expression, are dispersed via mitochondrial membrane dynamics.
Area of Science:
- Cell Biology
- Mitochondrial Biology
- Molecular Biology
Background:
- Mitochondria possess their own genetic material and protein synthesis machinery.
- Mitochondrial RNA granules (MRGs) are sub-compartments in the mitochondrial matrix, implicated in gene expression regulation.
- The structural and dynamic properties of MRGs are not well understood.
Purpose of the Study:
- To investigate the internal architecture and dynamic properties of mitochondrial RNA granules (MRGs).
- To understand the role of MRGs in mitochondrial dynamics and gene expression.
Main Methods:
- Fluorescence super-resolution localization microscopy
- Correlative electron microscopy
- Live-cell super-resolution structured illumination microscopy
- Fluorescence recovery after photobleaching
Main Results:
- MRGs exhibit an ultrastructure of compacted RNA within a protein cloud.
- MRGs display fluid condensate properties, including rapid component exchange and fusion.
- MRG fusion is linked to mitochondrial remodeling, and their distribution is influenced by mitochondrial fission/fusion dynamics.
Conclusions:
- MRGs are nanoscale fluid compartments within the mitochondrial matrix.
- Mitochondrial membrane dynamics play a key role in the dispersion of MRGs.
- MRGs are integral to mitochondrial function and organization.
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