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Published on: October 7, 2025
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Smart hybrid microscopy for cell-friendly detection of rare events
Willi L Stepp1, Giorgio Tortarolo2, Juan C Landoni2
1Institute of Physics, Swiss Federal Institute of Technology Lausanne (EPFL), Lausanne, Switzerland. willi@stepp.one.
Nature Communications
|January 7, 2026
Summary
Hybrid event-driven acquisition (EDA) uses label-free microscopy and neural networks to trigger fluorescence imaging only when needed. This reduces phototoxic damage, improving cell-friendly imaging of rare biological events.
Area of Science:
- Cellular and Molecular Imaging
- Biophysics
- Microscopy Techniques
Background:
- Fluorescence microscopy provides detailed spatial and dynamic information in living samples.
- Extended imaging of rare biological events is limited by phototoxicity and sample health trade-offs.
Purpose of the Study:
- To introduce hybrid event-driven acquisition (EDA), a novel framework for cell-friendly fluorescence imaging.
- To reduce phototoxic damage while maintaining functional specificity during live-cell imaging.
Main Methods:
- Developed a hybrid-EDA framework combining phase-contrast and fluorescence microscopy.
- Implemented dynamics-informed neural networks for event detection in label-free microscopy.
- Triggered smart fluorescence acquisitions based on detected biological events.
Main Results:
- Demonstrated reduced phototoxic damage in live-cell imaging.
- Enabled improved imaging of organelle contacts and mitochondrial divisions.
- Successfully obtained specific functional information from fluorescence when beneficial.
Conclusions:
- Hybrid-EDA offers a powerful and general strategy for cell-friendly imaging.
- This approach facilitates insights into dynamic and rare biological processes.
- The framework enhances the ability to study cellular dynamics without compromising sample health.

