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Updated: Jul 15, 2026

Characterizing Individual Protein Aggregates by Infrared Nanospectroscopy and Atomic Force Microscopy
Published on: September 12, 2019
Unraveling intra-aggregate structural disorder using single-molecule spectroscopy.
T Kunsel1, A Löhner2, J J Mayo1
1University of Groningen, Zernike Institute for Advanced Materials, Nijenborgh 4, 9747 AG Groningen, The Netherlands.
Structural disorder in molecular aggregates impacts optical properties. This study uses linewidth analysis on individual zinc-chlorin (ZnChl) nanotubes to reveal how molecular orientation variations explain spectral anomalies.
Area of Science:
- Molecular aggregates
- Supramolecular chemistry
- Optical spectroscopy
Background:
- Structural disorder in molecular aggregates significantly affects optical functionality.
- Ensemble measurements are insufficient for characterizing intra-aggregate structural disorder.
- Zinc-chlorin (ZnChl) nanotubular molecular aggregates exhibit spectral anomalies.
Purpose of the Study:
- To characterize intra-aggregate structural disorder in ZnChl nanotubes.
- To investigate the anomaly in linewidths between higher-energy and lower-energy absorption bands.
- To model the correlation of linewidths to understand structural variations.
Main Methods:
- Single-aggregate fluorescence excitation experiments.
- Linewidth analysis of absorption bands.
- Frenkel exciton modeling.
Main Results:
- Observed anomaly in linewidths: higher-energy bands are narrower than lower-energy bands.
- Correlation between linewidths of different bands was analyzed for individual aggregates.
- Frenkel exciton model successfully explained the observed linewidth correlations.
Conclusions:
- Small variations in molecular orientations within aggregates are the cause of the observed spectral anomalies.
- Single-aggregate spectroscopy combined with theoretical modeling is effective for probing structural disorder.
- Understanding structural disorder is crucial for controlling the optical functionality of molecular aggregates.
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