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Acquisition of Resting-State Functional Magnetic Resonance Imaging Data in the Rat
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Improved resting state functional connectivity sensitivity and reproducibility using a multiband multi-echo

Alexander D Cohen1, Baolian Yang2, Brice Fernandez3

  • 1Department of Radiology, Medical College of Wisconsin, 8701 Watertown Plank Road, Milwaukee, WI 53226, United States.

Neuroimage
|October 18, 2020
PubMed
Summary
This summary is machine-generated.

Multiband multi-echo (MBME) resting-state fMRI shows higher functional connectivity and reproducibility compared to standard multiband (MB) imaging. This advanced MBME technique offers improved data quality for brain connectivity research.

Keywords:
Functional connectivity densityMulti-echoMulti-echo independent component analysisMultibandReproducibilityResting state functional MRI

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Area of Science:

  • Neuroimaging
  • Functional Magnetic Resonance Imaging (fMRI)
  • Brain Connectivity

Background:

  • Recent advances in fMRI include multiband (MB) and multi-echo (ME) imaging, enhancing temporal and spatial resolution.
  • MB imaging acquires multiple slices simultaneously, while ME imaging captures multiple echoes for denoising and increased sensitivity.
  • Combined MBME sequences offer potential for improved resting-state fMRI (rs-fMRI) data acquisition.

Purpose of the Study:

  • To compare the performance of a combined multiband multi-echo (MBME) rs-fMRI sequence against a standard multiband (MB) single-echo sequence.
  • To evaluate resting-state functional connectivity (RSFC) and reproducibility using both standard and advanced denoising techniques.
  • To assess functional connectivity density (FCD) as a data-driven metric.

Main Methods:

  • Acquired rs-fMRI data from 29 subjects using both MBME (three echoes) and MB (single echo) sequences.
  • Processed data with standard denoising and advanced methods: ME-ICA for MBME and ICA-AROMA for MB.
  • Analyzed RSFC via seed-based and region-of-interest (ROI) approaches, and assessed reproducibility using the Dice coefficient.

Main Results:

  • MBME sequences demonstrated significantly higher seed-based and ROI-based RSFC compared to MB sequences, irrespective of denoising method.
  • Reproducibility of connectivity metrics, evaluated by the Dice coefficient, was significantly higher for MBME data.
  • Functional connectivity density (FCD) was also significantly higher in MBME data.

Conclusions:

  • The combined MBME technique yields higher resting-state functional connectivity and improved reproducibility in rs-fMRI compared to standard MB imaging.
  • MBME is a promising advancement for acquiring high-quality rs-fMRI data, enhancing the study of brain connectivity.
  • These findings support the adoption of MBME sequences for more sensitive and reliable neuroimaging research.