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Related Experiment Video

Updated: Jun 19, 2026

Interfacing 3D Engineered Neuronal Cultures to Micro-Electrode Arrays: An Innovative In Vitro Experimental Model

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Using interactive digital notebooks for bioscience and informatics education.

Alan Davies¹, Frances Hooley¹, Peter Causey-Freeman¹

¹School of Health Sciences, University of Manchester, Manchester, United Kingdom.

Plos Computational Biology

|November 5, 2020

Summary

This summary is machine-generated.

This primer explores using Jupyter notebooks for bio/health informatics education. Interactive notebooks facilitate data analysis and create engaging learning experiences for diverse audiences.

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Area of Science:

Bioinformatics
Health Informatics
Educational Technology

Background:

Interactive digital notebooks offer a unified format for data analysis and reporting.
They enable the creation of rich, interactive content for educational narratives.
Jupyter notebooks are increasingly relevant in scientific and health education.

Purpose of the Study:

To introduce fundamental aspects of using Jupyter notebooks in bio/health informatics education.
To demonstrate the application of Jupyter notebooks in teaching programming skills.
To provide practical case studies for educators and researchers.

Main Methods:

A primer on the core features of Jupyter notebooks for educational purposes.
Two case studies detailing the implementation of Jupyter notebooks in Master's and PG Cert programs.
Focus on teaching programming skills to both non-coders and technical audiences.

Main Results:

Jupyter notebooks effectively support data analysis and reporting within a single digital format.
The interactive nature of notebooks enhances engagement and facilitates learning.
Successful application in diverse educational settings, from blended Master's to online PG Cert programs.

Conclusions:

Jupyter notebooks are valuable tools for teaching bio/health informatics and programming.
They cater to varied learning needs, from beginners to advanced students.
Interactive notebooks promote a dynamic and effective approach to scientific education.