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Updated: Dec 1, 2025

Combining Fluidic Devices with Microscopy and Flow Cytometry to Study Microbial Transport in Porous Media Across Spatial Scales
Published on: November 25, 2020
Universal law for diffusive mass transport through mycelial networks.
Stefan Schmideder1, Henri Müller1, Lars Barthel2
1School of Life Sciences Weihenstephan, Chair of Process Systems Engineering, Technical University of Munich, Freising, Germany.
Scientists discovered a universal law governing nutrient and oxygen diffusion in filamentous fungal pellets. This breakthrough enables predicting and controlling pellet morphology for improved biotechnology and circular economy applications.
Area of Science:
- Biotechnology
- Circular Economy
- Bioprocess Engineering
- Mycology
Background:
- Filamentous fungi are crucial for biotechnology and the circular economy, but controlling their hyphal growth and macroscopic morphology for optimal product titers remains challenging.
- Industrial cultivations often result in fungal pellets, characterized by dense networks of branched hyphae.
- The core of these pellets experiences nutrient and oxygen depletion due to limited diffusive mass transport, negatively impacting bioprocess productivity.
Purpose of the Study:
- To demonstrate the existence of a generalized law for diffusive mass transport within filamentous fungal pellets.
- To establish a predictive model for diffusion within these pellets, applicable to nutrients, oxygen, and secreted metabolites.
- To advance the rational design of fungal pellet morphologies at both genetic and process engineering levels.
Main Methods:
- Conducted diffusion computations using three-dimensional X-ray microtomography on 66 fungal pellets from four industrially relevant filamentous fungi.
- Utilized 3125 Monte Carlo simulations of pellets to complement experimental data.
- Analyzed the relationship between the diffusion hindrance factor and the solid hyphal fraction.
Main Results:
- Identified a generalized scaling law for diffusive mass transport in filamentous fungal pellets.
- Demonstrated that the diffusion hindrance factor scales with the solid hyphal fraction.
- Validated the law across diverse fungal species and pellet structures.
Conclusions:
- The discovered scaling law provides a predictable framework for mass transport within fungal pellets.
- This finding will enable the optimization of fungal pellet morphology for enhanced bioprocess efficiency and productivity.
- The research facilitates the rational engineering of fungal cell factories for improved biotechnology and circular economy applications.
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