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Spiroindoline-Capped Selective HDAC6 Inhibitors: Design, Synthesis, Structural Analysis, and Biological Evaluation
A Prasanth Saraswati1, Nicola Relitti1, Margherita Brindisi1
1Department of Biotechnology, Chemistry and Pharmacy, DoE Department of Excellence 2018-2022, University of Siena, via Aldo Moro 2, I-53100 Siena, Italy.
ACS Medicinal Chemistry Letters
|November 20, 2020
Summary
Researchers developed novel spiroindoline-based inhibitors targeting HDAC6 (histone deacetylase 6). Compound 6j showed high potency and selectivity, demonstrating anticancer activity by increasing tubulin acetylation and inducing apoptosis.
Area of Science:
- Medicinal Chemistry
- Molecular Biology
- Biochemistry
Background:
- Histone deacetylase inhibitors (HDACi) show therapeutic potential for neurodegeneration, cancer, and rare diseases.
- HDAC6 is a specific isoform implicated in various cellular processes relevant to disease.
Purpose of the Study:
- To design and synthesize novel spiroindoline-based inhibitors selective for the HDAC6 isoform.
- To identify potent and selective HDAC6 inhibitors for potential therapeutic applications.
Main Methods:
- X-ray crystallography was used to guide the structure-based design of inhibitors.
- Synthesis of a series of spiroindoline derivatives.
- In vitro biological assays were performed to evaluate inhibitory activity, selectivity, and antiproliferative effects.
Main Results:
- Compound 6j emerged as the most potent and selective inhibitor of human HDAC6 (hHDAC6).
- Compounds 6b, 6h, and 6j exhibited significant antiproliferative activity against various cancer cell lines.
- Western blotting confirmed increased tubulin acetylation and PARP cleavage, indicating apoptosis induction.
- Compound 6j demonstrated HDAC6-dependent inhibition of pSTAT3 phosphorylation.
Conclusions:
- Spiroindoline derivatives represent a promising scaffold for developing selective HDAC6 inhibitors.
- Compound 6j warrants further investigation as a potential therapeutic agent for cancers and other HDAC6-related disorders.

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