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Updated: Nov 29, 2025

Rapid and Efficient Spatiotemporal Monitoring of Normal and Aberrant Cytosine Methylation within Intact Zebrafish Embryos
Published on: August 18, 2022
DNA methylation differences at birth after conception through ART
Elmar W Tobi1,2, Catarina Almqvist3,4, Anna Hedman5
1Periconceptional Epidemiology, Department of Obstetrics and Gynaecology, University Medical Center Rotterdam, 3015 MC GE Rotterdam, The Netherlands.
Assisted reproductive technology (ART) is linked to DNA methylation (DNAm) changes in cord blood. These limited changes were observed in 19 specific locations, with no differences noted between IVF and ICSI procedures.
Area of Science:
- Epigenetics and Reproductive Medicine
- Neonatal Health and Development
- Genomic Imprinting
Background:
- Previous research on assisted reproductive technology (ART) and DNA methylation (DNAm) has yielded conflicting results.
- Studies have reported both widespread and localized DNAm alterations following IVF or ICSI.
- No prior study has investigated genome-wide neonatal DNAm in relation to both IVF and ICSI.
Purpose of the Study:
- To investigate the association between ART conception (IVF/ICSI) and DNA methylation patterns in cord blood.
- To determine if there are differences in DNA methylation patterns between infants conceived via IVF versus ICSI.
- To explore potential links between ART-associated DNAm changes and genes involved in brain function or subfertility.
Main Methods:
- A cross-sectional study involving 87 infants conceived via ART and 70 conceived naturally.
- DNA methylation was measured in cord blood DNA using a 450k microarray.
- Statistical analyses included robust linear models and Tukey's tests to identify group differences in DNA methylation at specific CpG sites.
Main Results:
- No association was found between ART conception and global methylation levels, imprinted loci, or meta-stable epialleles.
- DNA methylation at 19 specific CpG sites was associated with ART conception, with effect sizes ranging from 0.5-4.9%.
- No significant differences in DNA methylation were observed between infants conceived via IVF and ICSI.
Conclusions:
- ART conception is associated with a small number of specific DNA methylation differences in cord blood compared to natural conception.
- The identified DNA methylation changes are limited in effect size and their functional consequences remain unclear.
- This study found no evidence to suggest differences in DNA methylation patterns between IVF and ICSI conception.
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