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Updated: Nov 27, 2025

Spontaneous Formation and Rearrangement of Artificial Lipid Nanotube Networks as a Bottom-Up Model for Endoplasmic Reticulum
Published on: January 22, 2019
Binding, unbinding and aggregation of crescent-shaped nanoparticles on nanoscale tubular membranes
Eric J Spangler1, Alexander D Olinger, P B Sunil Kumar
1Department of Biomedical Engineering and Department of Physics and Materials Science, The University of Memphis, Memphis, TN 38152, USA.
Abstract:
Using molecular dynamics simulations of a coarse-grained implicit solvent model, we investigate the binding of crescent-shaped nanoparticles (NPs) on tubular lipid membranes. The NPs adhere to the membrane through their concave side. We found that the binding/unbinding transition is first-order, with the threshold binding energy being higher than the unbinding threshold, and the energy barrier between the bound and unbound states at the transition that increases with increasing the NP's arclength Lnp or curvature mismatch μ = Rc/Rnp, where Rc and Rnp are the radii of curvature of the tubular membrane and the NP, respectively. Furthermore, we found that the threshold binding energy increases with increasing either Lnp or μ. NPs with curvature larger than that of the tubule (μ > 1) lie perpendicularly to the tubule's axis. However, for μ smaller than a specific arclength-dependent mismatch μ*, the NPs are tilted with respect to the tubule's axis, with the tilt angle that increases with decreasing μ. We also investigated the self-assembly of the NPs on the tubule at relatively weak adhesion strength and found that for μ > 1 and high values of Lnp, the NPs self-assemble into linear chains, and lie side-by-side. For μ < μ* and high Lnp, the NPs also self-assemble into chains, while being tilted with respect to the tubule's axis.
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