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Information Theory in Computational Biology: Where We Stand Today
Pritam Chanda1,2, Eduardo Costa3, Jie Hu1
1Corteva Agriscience™, Indianapolis, IN 46268, USA.
Entropy (Basel, Switzerland)
|December 8, 2020
Summary
Information theory, pioneered by Claude Shannon, provides foundational concepts for data compression and communication. This review explores its key applications across computational biology research areas.
Area of Science:
- Computational Biology
- Information Theory
- Statistical Learning
Background:
- Claude Shannon's 1948 work established the foundation for information theory.
- Information theory is crucial for data compression and communication over noisy channels.
- It underpins statistical learning, inference, physics, and biological sciences.
Purpose of the Study:
- To review fundamental information theory concepts.
- To describe applications of information theory in computational biology.
- To highlight its role in diverse biological research areas.
Main Methods:
- Review of foundational information theory principles.
- Exploration of established and emerging applications.
- Synthesis of concepts across multiple computational biology domains.
Main Results:
- Information theory offers powerful tools for analyzing biological data.
- Key applications include gene expression, sequence analysis, and disease mapping.
- The review details its utility in metabolomics and protein analysis.
Conclusions:
- Information theory is a versatile framework with broad applicability in computational biology.
- Its principles are essential for advancing research in genomics, proteomics, and systems biology.
- The study underscores the interdisciplinary impact of Shannon's foundational work.
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