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Single image super-resolution for whole slide image using convolutional neural networks and self-supervised color
Bin Li1, Adib Keikhosravi2, Agnes G Loeffler3
1Laboratory for Optical and Computational Instrumentation, Department of Biomedical Engineering, University of Wisconsin-Madison, Madison, WI 53706, USA; Morgridge Institute for Research, Madison, WI 53706, USA.
Medical Image Analysis
|December 28, 2020
Summary
We developed a deep learning method for reconstructing high-resolution histology images from low-resolution scans. This approach enhances accessibility and quality for digital pathology diagnostics.
Area of Science:
- Digital Pathology
- Computational Imaging
- Artificial Intelligence in Medicine
Background:
- High-cost whole slide scanners and massive datasets limit digital pathology adoption.
- Existing low-cost scanners produce low-resolution images unsuitable for detailed analysis.
Purpose of the Study:
- To develop a deep learning-based solution for reconstructing high-resolution histology images from low-resolution inputs.
- To improve accessibility and reduce storage/acquisition challenges in digital pathology.
Main Methods:
- Implemented a single image super-resolution (SISR) framework using multi-scale fully convolutional networks.
- Incorporated conditional generative adversarial loss to minimize output image blurriness.
- Employed a progressive training strategy with a normally distributed, increasing scaling factor.
Main Results:
- The SISR framework successfully reconstructed high-resolution images with clinical-level quality.
- A self-supervised color normalization method effectively removed staining variations.
- The combined approach demonstrated generalization on unseen patient tissue cohorts.
Conclusions:
- Deep learning-based SISR offers a viable solution to enhance digital pathology accessibility and quality.
- The proposed method reconstructs clinically relevant high-resolution images from low-cost, low-resolution scans.
- Color normalization improves the robustness and generalizability of the SISR framework for diverse datasets.

