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Updated: Nov 23, 2025

Enhanced Genome Editing with Cas9 Ribonucleoprotein in Diverse Cells and Organisms
Published on: May 25, 2018
Chemogenetic System Demonstrates That Cas9 Longevity Impacts Genome Editing Outcomes
Vedagopuram Sreekanth1,2,3, Qingxuan Zhou1,2,3, Praveen Kokkonda1,2,3
1Chemical Biology and Therapeutics Science Program, Broad Institute of MIT and Harvard, Cambridge, Massachusetts 02142, United States.
We developed a chemogenetic system to control Cas9 longevity, reducing off-target effects and improving genome editing precision. This method enables tunable control over DNA repair pathways and editing outcomes.
Area of Science:
- Molecular Biology
- Biotechnology
- Genetics
Background:
- Prolonged Cas9 activity in genome engineering leads to off-target mutations, genotoxicity, and mosaicism.
- Existing methods for controlling Cas9 temporal activity are often cumbersome.
Purpose of the Study:
- To develop a chemogenetic system for rapid and controllable degradation of Cas9.
- To investigate the impact of tunable Cas9 longevity on genome editing outcomes and specificity.
Main Methods:
- Engineered a chemogenetic system to recruit Cas9 to a ubiquitin ligase for proteasomal degradation.
- Demonstrated efficient Cas9 degradation in cells across multiple species.
- Controlled Cas9 lifetime to influence DNA repair pathway choice and editing outcomes.
Main Results:
- Achieved rapid and tunable degradation of Cas9 using the chemogenetic system.
- Demonstrated successful genome editing with biased repair pathway selection and genotypic outcomes.
- Reduced off-target effects by dosably controlling Cas9 activity and specificity.
Conclusions:
- The developed chemogenetic system provides precise temporal control over Cas9 activity.
- This system enhances genome editing precision by mitigating off-target effects and enabling desired repair pathway biasing.
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