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Computationally predicted SARS-COV-2 encoded microRNAs target NFKB, JAK/STAT and TGFB signaling pathways

Merve Nur Aydemir1, Habes Bilal Aydemir2, Ertan Mahir Korkmaz1

  • 1Department of Molecular Biology and Genetics, Faculty of Science, Sivas Cumhuriyet University, Sivas, Turkey.

Gene Reports
|January 5, 2021
PubMed

Keywords:
ACE-2, angiotensin-converting enzyme 2AKT1, AKT serine/threonine kinase 1BCL2, BCL2 apoptosis regulatorCDK1, cyclin dependent kinase 1CDKL2, cyclin dependent kinase like 2COVID19, new type corona virus diseaseCTNNB1, catenin beta 1CXCL1, C-X-C motif chemokine ligand 1CXCL10, C-X-C motif chemokine ligand 10CXCL11, C-X-C motif chemokine ligand 11CXCL16, C-X-C motif chemokine ligand 16CXCL9, C-X-C motif chemokine ligand 9E2F1, E2F transcription factor 1EIF4A1, eukaryotic translation initiation factor 4A1GRB2, growth factor receptor bound protein 2HDAC1, histone deacetylase 1HDAC2, histone deacetylase 2HDAC3, histone deacetylase 3HIF1A, hypoxia inducible factor 1 subunit alphaICTV, International Committee on Taxonomy of VirusesIFNGR2, interferon gamma receptor 2IKBKE, inhibitor of nuclear factor kappa B kinase subunit epsilonIL10, interleukin 10IL13, interleukin 13IL15, interleukin 15IL16, interleukin 16IL17A, interleukin 17 AIL2, interleukin 2IL21, interleukin 21IL22, interleukin 22IL24, interleukin 24IL25, interleukin 25IL33, interleukin 33IL5, interleukin 5IL7, interleukin 7IL8, interleukin 8JAK/STATJAK1, Janus kinase 1JAK2, Janus kinase 2JARID1A, lysine demethylase 5AJARID1B, lysine demethylase 5BJARID1C, lysine demethylase 5CJARID2, Jumonji and AT-rich interaction domain containing 2KEGG, Kyoto Encyclopedia of Genes and GenomesMAPK1, mitogen-activated protein kinase 1MAPK3, mitogen-activated protein kinase 3MAPK4, mitogen-activated protein kinase 4MAPK6, mitogen-activated protein kinase 6MAPK7, mitogen-activated protein kinase 7NFKBNFKB1, nuclear factor kappa B subunit 1NFKBIE, NFKB inhibitor epsilonNOS3, nitric oxide synthase 3PANTHER, protein analysis through evolutionary relationshipsPIK3CA, phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alphaPTEN, phosphatase and tensin homologRB1, RB transcriptional corepressor 1RHOA, ras homolog family member ASARS-CoV-2SARS-CoV-2, severe acute respiratory disease coronavirus type 2SMAD2, SMAD family member 2SMAD3, SMAD family member 3SMAD4, SMAD family member 4SOCS1, suppressor of cytokine signaling 1SOCS3, suppressor of cytokine signaling 3SOCS4, suppressor of cytokine signaling 4SOCS5, suppressor of cytokine signaling 5SOCS6, suppressor of cytokine signaling 6SOS1, SOS Ras/Rac guanine nucleotide exchange factor 1SP1, Sp1 transcription factorSTAT3, signal transducer and activator of transcription 3STAT4, signal transducer and activator of transcription 4STAT5B, signal transducer and activator of transcription 5BSTAT6, signal transducer and activator of transcription 6SUMO1, small ubiquitin like modifier 1SUMO2, small ubiquitin like modifier 2TBP, TATA-box binding proteinTGFBTGFBR1, transforming growth factor beta receptor 1TGFBR2, transforming growth factor beta receptor 2TMPRSS11A, transmembrane serine protease 11ATMPRSS4, transmembrane serine protease 4TNFRSF21, TNF receptor superfamily member 21WHO, World Health OrganizationmiRNA

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