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QSMART: Quantitative susceptibility mapping artifact reduction technique.

Negin Yaghmaie1, Warda T Syeda2, Chengchuan Wu1

  • 1Melbourne Brain Centre Imaging Unit, The University of Melbourne, Australia; Department of Biomedical Engineering, The University of Melbourne, Australia.

Neuroimage
|January 23, 2021
PubMed
Summary
This summary is machine-generated.

Quantitative susceptibility mapping (QSM) artifacts are reduced by QSMART, a novel post-processing pipeline. This method improves susceptibility mapping accuracy in vivo and ex vivo, enabling more reliable results.

Keywords:
Artifact suppressionQuantitative Susceptibility MappingSpatially dependent filteringStreaking artifactsTwo-stage parallel inversion

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Area of Science:

  • Medical Imaging
  • Biophysics
  • Neuroimaging

Background:

  • Quantitative susceptibility mapping (QSM) is an advanced MRI technique for mapping tissue magnetic susceptibility from phase images.
  • QSM is an ill-posed inverse problem, often plagued by streaking and banding artifacts, especially around high susceptibility sources like vasculature.
  • Existing QSM methods struggle with artifact reduction, limiting accurate susceptibility quantification.

Purpose of the Study:

  • To introduce QSMART, a novel post-processing pipeline designed to mitigate streaking and banding artifacts in QSM.
  • To improve the accuracy and robustness of susceptibility value estimation in various biological tissues.

Main Methods:

  • QSMART employs a two-stage parallel inversion process for artifact reduction.
  • A Frangi filter generates a vasculature mask for separate susceptibility estimation of tissue and veins.
  • Spatially dependent filtering is utilized for background field removal, integrating susceptibility estimates for the final QSM map.
  • QSMART was validated against RESHARP/iLSQR and V-SHARP/iLSQR using numerical phantoms and in vivo/ex vivo multi-species MRI data.

Main Results:

  • QSMART demonstrated superior suppression of phase artifacts near the cortex compared to RESHARP and V-SHARP, without causing brain edge erosion.
  • The pipeline effectively reduced streaking artifacts and enhanced tissue contrast in QSM maps.
  • QSMART outperformed conventional methods in artifact reduction and image quality across diverse datasets.

Conclusions:

  • QSMART significantly reduces artifacts in quantitative susceptibility mapping.
  • The pipeline enables more robust and accurate estimation of magnetic susceptibility values.
  • QSMART holds promise for improved in vivo and ex vivo neuroimaging applications.