Related Experiment Video
Updated: Nov 17, 2025

Author Spotlight: A Selective Luciferase-Based Assay for Monitoring ATG4B 27 Activity in Cells
Published on: June 30, 2023
Inhibitors of cullin-RING E3 ubiquitin ligase 4 with antitumor potential
Kenneth Wu1, Khoi Q Huynh2,3, Iris Lu1
1Department of Oncological Sciences, The Icahn School of Medicine at Mount Sinai, New York, NY 10029-6574.
Abstract:
Cullin-RING (really intersting new gene) E3 ubiquitin ligases (CRLs) are the largest E3 family and direct numerous protein substrates for proteasomal degradation, thereby impacting a myriad of physiological and pathological processes including cancer. To date, there are no reported small-molecule inhibitors of the catalytic activity of CRLs. Here, we describe high-throughput screening and medicinal chemistry optimization efforts that led to the identification of two compounds, 33-11 and KH-4-43, which inhibit E3 CRL4 and exhibit antitumor potential. These compounds bind to CRL4's core catalytic complex, inhibit CRL4-mediated ubiquitination, and cause stabilization of CRL4's substrate CDT1 in cells. Treatment with 33-11 or KH-4-43 in a panel of 36 tumor cell lines revealed cytotoxicity. The antitumor activity was validated by the ability of the compounds to suppress the growth of human tumor xenografts in mice. Mechanistically, the compounds' cytotoxicity was linked to aberrant accumulation of CDT1 that is known to trigger apoptosis. Moreover, a subset of tumor cells was found to express cullin4 proteins at levels as much as 70-fold lower than those in other tumor lines. The low-cullin4-expressing tumor cells appeared to exhibit increased sensitivity to 33-11/KH-4-43, raising a provocative hypothesis for the role of low E3 abundance as a cancer vulnerability.
Insights
Researchers identified two novel compounds, 33-11 and KH-4-43, that inhibit Cullin-RING (CRL) E3 ubiquitin ligases. These compounds show antitumor potential by stabilizing a key substrate, leading to cancer cell death and suppressed tumor growth.
Area of Science:
- Biochemistry
- Molecular Biology
- Oncology
Background:
- Cullin-RING (CRL) E3 ubiquitin ligases are crucial for protein degradation and cellular processes, including cancer development.
- No small-molecule inhibitors targeting CRL catalytic activity have been reported previously.
Purpose of the Study:
- To identify and characterize small-molecule inhibitors of CRL E3 ligases.
- To evaluate the antitumor potential of identified inhibitors.
Main Methods:
- High-throughput screening and medicinal chemistry optimization were employed.
- Compounds 33-11 and KH-4-43 were identified and characterized for their inhibitory effects on CRL4.
- In vitro and in vivo studies using tumor cell lines and xenografts were conducted.
Main Results:
- Compounds 33-11 and KH-4-43 inhibit CRL4 by binding to its core catalytic complex.
- These inhibitors block CRL4-mediated ubiquitination and lead to the stabilization of the substrate CDT1.
- Cytotoxicity was observed in 36 tumor cell lines, and tumor growth was suppressed in mouse xenografts.
- Low expression of cullin4 proteins correlated with increased sensitivity to the compounds, suggesting a potential cancer vulnerability.
Conclusions:
- Novel small-molecule inhibitors (33-11 and KH-4-43) targeting CRL4 E3 ligases have been developed.
- These compounds demonstrate significant antitumor activity through CDT1 stabilization and apoptosis induction.
- The findings suggest that low E3 ligase abundance could represent a vulnerability in certain cancers.
More Related Videos
Related Concept Videos
Inhibition of Cdk Activity
Drugs that Stabilize Microtubules
Drugs that Destabilize Microtubules
Abnormal Proliferation
Mitogens and the Cell Cycle
Targeted Cancer Therapies
There are several types of targeted therapies against...

