Related Experiment Video
Updated: Nov 16, 2025

A Knowledge Graph Approach to Elucidate the Role of Organellar Pathways in Disease via Biomedical Reports
Published on: October 13, 2023
Beyond adverse outcome pathways: making toxicity predictions from event networks, SAR models, data and knowledge
Thomas Ball1, Christopher G Barber1, Alex Cayley1
1Lhasa Limited, Granary Wharf House, 2 Canal Wharf, Leeds, LS11 5PS, UK.
Adverse outcome pathways (AOPs) and key events (KEs) form networks to predict chemical toxicity. This approach integrates assay data and structure-activity relationships for risk assessment.
Area of Science:
- Toxicology
- Computational chemistry
- Risk assessment
Background:
- Adverse outcome pathways (AOPs) provide a framework for understanding toxicity mechanisms.
- Key events (KEs) and their relationships are fundamental components of AOPs.
- Predicting adverse outcomes (AOs) is crucial for chemical safety assessment.
Purpose of the Study:
- To construct networks using AOP building blocks (KEs and relationships) for predicting AOs.
- To integrate diverse data sources, including assay data and structure-activity relationship (SAR) predictions, into a unified framework.
- To develop an information-rich display for visualizing knowledge, data, and AO predictions for both general cases and specific chemicals.
Main Methods:
- Utilized key events (KEs) and key event relationships from AOPs to build predictive networks.
- Augmented KE networks with data from toxicological assays and SAR predictions linking chemical classes to KEs.
- Employed a reasoning framework to combine these inputs for generating AO predictions.
Main Results:
- Successfully constructed networks of KEs for predicting adverse outcomes (AOs).
- Demonstrated the integration of assay data and SAR predictions within the network framework.
- Provided illustrative examples for skin sensitization, reprotoxicity, and non-genotoxic carcinogenicity, showcasing the predictive capability for individual chemicals and abstract cases.
Conclusions:
- Networks of key events (KEs) offer a robust method for predicting adverse outcomes (AOs).
- The integration of diverse data sources enhances the predictive power and utility of AOP-based networks.
- This approach provides valuable tools for chemical risk assessment and regulatory decision-making.
More Related Videos
17:28Human Pluripotent Stem Cell Based Developmental Toxicity Assays for Chemical Safety Screening and Systems Biology Data Generation
Published on: June 17, 2015
05:47In Silico Modeling Method for Computational Aquatic Toxicology of Endocrine Disruptors: A Software-Based Approach Using QSAR Toolbox
Published on: August 28, 2019
Related Concept Videos
Toxic Reactions: Overview
Toxicity falls into two primary categories: local and systemic.
Local toxicity appears at the exposure site, such as protein denaturation caused by caustic substances.
In contrast, systemic toxicity requires the toxic agent's absorption and distribution,...
Pharmacovigilance
This process, termed pharmacovigilance, aims to detect, evaluate, and minimize harmful effects related to medication use. The data collection for pharmacovigilance depends on spontaneous reporting systems, where healthcare professionals or patients voluntarily report suspected ADRs.
In some cases, there...
Structure-Activity Relationships and Drug Design
SAR studies the intricate relationship between a drug's chemical structure and biological activity. It focuses on understanding how modifications to a drug's structure can influence...
Pharmacokinetic Models: Overview
There are three primary types of models: empirical, compartment, and physiological. Empirical models, with minimal...
Types of Biopharmaceutical Studies: Controlled and Non-Controlled Approaches
Non-controlled studies, commonly employed for initial exploration, lack a control group, rendering them susceptible to biases and external influences. In contrast,...
Types of Toxins
Air pollutants, primarily gases, pose significant threats to respiratory health, leading to conditions like hypoxia, lung cancer, and in extreme cases, death.
Environmental pollutants like...