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Identifying subpopulations in multicellular systems by quantitative chemical imaging using label-free hyperspectral
Iestyn Pope1, Francesco Masia1, Kenneth Ewan1
1Cardiff University, School of Biosciences, Sir Martin Evans Building, Museum Avenue, Cardiff CF10 3AX, UK. borrip@cf.ac.uk.
The Analyst
|February 22, 2021
Summary
Quantitative hyperspectral coherent anti-Stokes Raman scattering (CARS) microscopy reveals cellular differences in complex tissues. This label-free method distinguishes cell types and states in liver organoids and brain tumors without prior knowledge.
Area of Science:
- Biomedical Optics
- Chemical Imaging
- Microscopy
Background:
- Quantitative hyperspectral coherent Raman scattering microscopy offers label-free, non-invasive chemical analysis.
- It provides spectrally and spatially resolved chemical information with sub-cellular resolution.
- This technique has the potential to advance the study of complex living multicellular systems.
Purpose of the Study:
- To apply quantitative hyperspectral CARS microscopy and data analysis to image living mouse liver organoids and xenografted mouse brain tissue.
- To demonstrate the method's capability in discriminating cellular sub-populations based on chemical content.
- To validate the findings using correlative fluorescence microscopy.
Main Methods:
- Utilized an in-house developed hyperspectral CARS microscope.
- Employed a quantitative data analysis pipeline for unsupervised analysis of chemical content.
- Performed correlative fluorescence microscopy for validation.
Main Results:
- Successfully discriminated different cellular sub-populations in liver organoids and brain tissue based on chemical composition.
- Identified cells in different cell cycle phases within organoids.
- Distinguished normal brain tissue from glioblastoma, and cancer stem cell-derived tumors from non-stem glioblastoma cells.
Conclusions:
- Quantitative hyperspectral CARS microscopy is effective for label-free chemical imaging of multicellular systems.
- The method enables identification of distinct cellular sub-populations in biologically relevant samples.
- This approach offers new opportunities for non-invasive disease diagnostics.

