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Updated: Nov 16, 2025

Microarray-based Identification of Individual HERV Loci Expression: Application to Biomarker Discovery in Prostate Cancer
Published on: November 2, 2013
Practical considerations for optimising homologous recombination repair mutation testing in patients with metastatic
David Gonzalez1, Joaquin Mateo2, Albrecht Stenzinger3
1Patrick G Johnston Centre for Cancer Research, Queen's University, Belfast, UK.
Abstract:
Analysis of the genomic landscape of prostate cancer has identified different molecular subgroups with relevance for novel or existing targeted therapies. The recent approvals of the poly(ADP-ribose) polymerase (PARP) inhibitors olaparib and rucaparib in the metastatic castration-resistant prostate cancer (mCRPC) setting signal the need to embed molecular diagnostics in the clinical pathway of patients with mCRPC to identify those who can benefit from targeted therapies. Best practice guidelines in overall biospecimen collection and processing for molecular analysis are widely available for several tumour types. However, there is no standard protocol for molecular diagnostic testing in prostate cancer. Here, we provide a series of recommendations on specimen handling, sample pre-analytics, laboratory workflow, and testing pathways to maximise the success rates for clinical genomic analysis in prostate cancer. Early involvement of a multidisciplinary team of pathologists, urologists, oncologists, radiologists, nurses, molecular scientists, and laboratory staff is key to enable optimal workflow for specimen selection and preservation at the time of diagnosis so that samples are available for molecular analysis when required. Given the improved outcome of patients with mCRPC and homologous recombination repair gene alterations who have been treated with PARP inhibitors, there is an urgent need to incorporate high-quality genomic testing in the routine clinical pathway of these patients.
Insights
Genomic testing is crucial for prostate cancer patients, especially those with metastatic castration-resistant prostate cancer (mCRPC). Standardized protocols are needed to ensure accurate molecular diagnostics for targeted therapies like PARP inhibitors.
Area of Science:
- Oncology
- Genomics
- Molecular Diagnostics
Background:
- Prostate cancer exhibits diverse molecular subgroups.
- PARP inhibitors (olaparib, rucaparib) are approved for metastatic castration-resistant prostate cancer (mCRPC).
- Lack of standardized protocols hinders molecular diagnostics in prostate cancer.
Purpose of the Study:
- Provide recommendations for specimen handling, pre-analytics, and laboratory workflow.
- Maximize success rates for clinical genomic analysis in prostate cancer.
- Facilitate identification of mCRPC patients benefiting from targeted therapies.
Main Methods:
- Multidisciplinary team involvement (pathologists, oncologists, etc.).
- Recommendations for specimen selection and preservation at diagnosis.
- Guidelines for laboratory workflow and testing pathways.
Main Results:
- Established a framework for optimal specimen handling and processing.
- Highlighted the importance of early multidisciplinary team engagement.
- Emphasized the need for high-quality genomic testing in routine clinical practice.
Conclusions:
- Standardized molecular diagnostic testing is essential for prostate cancer.
- Genomic testing identifies patients eligible for targeted therapies, including PARP inhibitors.
- Integrating genomic testing into the mCRPC clinical pathway improves patient outcomes.
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