Related Experiment Video
Updated: Nov 15, 2025

Analysis of RNA Processing Reactions Using Cell Free Systems: 3' End Cleavage of Pre-mRNA Substrates in vitro
Published on: May 3, 2014
Reciprocal Links between Pre-messenger RNA 3'-End Processing and Genome Stability.
Martin Dutertre1, Rym Sfaxi1, Stéphan Vagner1
1Institut Curie, Université PSL, CNRS UMR3348, INSERM U1278, 91400 Orsay, France; Université Paris-Saclay, CNRS UMR3348, INSERM U1278, 91400 Orsay, France; Equipe Labellisée Ligue Nationale Contre le Cancer.
DNA damage globally inhibits pre-messenger RNA (pre-mRNA) 3'-end processing. This review highlights how pre-mRNA processing factors and DNA damage response genes interact to maintain genome stability, a conserved mechanism relevant to disease.
Area of Science:
- Molecular Biology
- Genetics
- Biochemistry
Background:
- Pre-messenger RNA (pre-mRNA) 3 -end processing, including cleavage and polyadenylation, is crucial for gene expression and is linked to transcription termination.
- DNA damage globally inhibits pre-mRNA 3 -end cleavage in both yeast and human cells, suggesting a coordinated cellular response.
- Emerging evidence reveals intricate connections between pre-mRNA 3 -end processing machinery and the maintenance of genome stability.
Purpose of the Study:
- To review the multifaceted relationship between pre-mRNA 3 -end processing and genome stability control.
- To elucidate how DNA damage impacts pre-mRNA processing pathways and vice versa.
- To highlight the evolutionary conservation and disease relevance of this interplay.
Main Methods:
- Literature review of recent findings on pre-mRNA 3 -end processing and DNA damage response.
- Analysis of gene regulation, including alternative polyadenylation (APA), under DNA damage conditions.
- Examination of the localization and function of pre-mRNA processing factors at DNA damage sites.
Main Results:
- DNA damage triggers global inhibition of pre-mRNA 3 -end cleavage.
- Specific DNA damage response (DDR) genes exhibit altered 3 -end processing or utilize APA upon DNA damage.
- Several pre-mRNA 3 -end processing factors play roles in preventing genome instability and are recruited to DNA damage sites.
Conclusions:
- The interplay between pre-mRNA 3 -end processing and genome stability is a conserved biological process.
- Dysregulation of this interplay can contribute to disease development.
- Understanding these connections offers insights into cellular responses to stress and potential therapeutic targets.
Related Concept Videos
RNA Stability
mRNA Stability and Gene Expression
Cis-acting Elements involved in mRNA stability
mRNA Stability and Gene Expression
Chromatin Structure Regulates pre-mRNA Processing
The chromatin structure, especially...
Pre-mRNA Processing: Modification of pre-mRNA Ends
Once about 20-40 ribonucleotides have been joined together by RNA polymerase, a group of enzymes adds a cap to the 5' end of the growing transcript. In this process, a 5' phosphate is replaced by modified guanosine that has a methyl group attached (7-methyl guanosine). This 5' cap helps...
pre-mRNA Processing
Once about 20-40 ribonucleotides have been joined together by RNA polymerase, a group of enzymes adds a “cap” to the 5’ end of the growing transcript. In this process, a 5’ phosphate is replaced by modified guanosine that has a methyl group attached to it (7-Methyl...

