Validation of an Integrated Risk Tool, Including Polygenic Risk Score, for Atherosclerotic Cardiovascular Disease in
Michael E Weale1, Fernando Riveros-Mckay1, Saskia Selzam1
1Genomics plc, Oxford, UK.
A new integrated risk tool (IRT) combining traditional risk factors with polygenic risk scores (PRS) improves atherosclerotic cardiovascular disease (ASCVD) risk prediction across diverse ancestries. This validated tool enhances accuracy for various ethnic groups, offering broader clinical utility.
Area of Science:
- Cardiovascular Medicine
- Genetics
- Preventive Cardiology
Background:
- The American College of Cardiology/American Heart Association (ACC/AHA) pooled cohort equations (ASCVD-PCE) tool is standard for 10-year atherosclerotic cardiovascular disease (ASCVD) risk assessment.
- ASCVD-PCE currently excludes genetic risk factors, limiting its comprehensive predictive capability.
- Polygenic risk scores (PRS) show promise in quantifying genetic predisposition to ASCVD and enhancing risk prediction models.
Purpose of the Study:
- To clinically validate a novel integrated risk tool (ASCVD-IRT) that combines ASCVD-PCE with PRS.
- To assess the performance of ASCVD-IRT in predicting 10-year ASCVD risk across diverse ethnic and ancestry groups.
- To demonstrate the improved predictive accuracy of ASCVD-IRT compared to ASCVD-PCE in multi-ethnic populations.
Main Methods:
- Development of the ASCVD-IRT by integrating ASCVD-PCE with PRS.
- Clinical validation of ASCVD-IRT across self-reported White, Black/African American, South Asian, and Hispanic ethnicities.
- Analysis of performance using net reclassification improvement (NRI) and assessment by genetically inferred ancestry.
Main Results:
- ASCVD-IRT demonstrated improved predictive performance over ASCVD-PCE in White (NRI: 2.7%), Black/African American (NRI: 2.5%), and South Asian (NRI: 8.7%) ethnicities.
- While confidence intervals for Hispanic ethnicity (NRI: 7.5%) included zero, PRS effect sizes were significant and comparable to White ethnicities.
- Comparable performance improvements were observed when analyzing individuals by genetically inferred ancestry, supporting broad applicability.
Conclusions:
- The ASCVD-IRT is clinically validated and shows improved 10-year ASCVD risk prediction across multiple ethnicities and ancestries.
- The integration of PRS significantly enhances risk prediction beyond traditional factors in diverse populations.
- These findings support the generalization and clinical adoption of ASCVD-IRT for comprehensive cardiovascular risk assessment in all ethnicities.
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