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Updated: Nov 10, 2025

Quantitative Proteomics Workflow using Multiple Reaction Monitoring Based Detection of Proteins from Human Brain Tissue
Published on: August 28, 2021
Quantitative Proteomics-Based Blood-Brain Barrier Study
1Division of Membrane Transport and Drug Targeting, Graduate School of Pharmaceutical Sciences, Tohoku University.
Quantitative proteomics reveals how drug transport across the blood-brain barrier (BBB) differs between species and models. This research identifies Claudin-11 as a key factor in multiple sclerosis and offers new therapeutic targets for CNS diseases.
Area of Science:
- Neuroscience
- Pharmacology
- Proteomics
Background:
- Understanding drug permeability across central nervous system (CNS) barriers is crucial for drug discovery, especially in CNS diseases.
- Molecular mechanisms at CNS barriers, like the blood-brain barrier (BBB), are vital for therapeutic development.
Purpose of the Study:
- To elucidate drug permeability and molecular mechanisms at human CNS barriers using quantitative proteomics.
- To compare transporter and receptor expression and function between animal models and humans, and in vitro versus in vivo systems.
Main Methods:
- Quantitative proteomics techniques were applied to blood-brain barrier (BBB) studies.
- Investigated transport systems at the human BBB, focusing on protein expression levels and functions.
- Validated in vitro models for reconstructing in vivo drug efflux activity, including P-glycoprotein (P-gp).
Main Results:
- Clarified quantitative differences in transporter and receptor expression between species and experimental systems.
- Demonstrated accurate reconstruction of in vivo P-gp efflux activity from in vitro systems in various models.
- Discovered Claudin-11 as a tight junction molecule involved in CNS barrier disruption in multiple sclerosis.
- Identified P-gp dysfunction leading to excessive glucocorticoid brain entry and nerve damage, treatable by targeting Abl/Src kinases.
Conclusions:
- Targeting tight junctions and transporters at CNS barriers offers potential therapeutic strategies for CNS diseases.
- Quantitative proteomics provides novel insights into CNS barrier function and disease mechanisms.
- The study highlights the importance of accurate in vitro models for predicting in vivo drug transport.
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