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Updated: Nov 9, 2025

A Restriction Enzyme Based Cloning Method to Assess the In vitro Replication Capacity of HIV-1 Subtype C Gag-MJ4 Chimeric Viruses
Published on: August 31, 2014
Distinct clonal evolution of B-cells in HIV controllers with neutralizing antibody breadth.
Deniz Cizmeci1, Giuseppe Lofano1, Evan Rossignol1
1Ragon Institute of MGH, MIT and Harvard, Cambridge, United States.
Investigating HIV controllers revealed that B-cell receptor (BCR) mutations correlate with antibody neutralization breadth. This suggests host factors, not just high viral load, may drive potent HIV antibody responses, informing future vaccine development.
Area of Science:
- Immunology
- Virology
- Genetics
Background:
- Antibody neutralization breadth against HIV-1 is rare during natural infection, often linked to high viral loads.
- Vaccine strategies have struggled to elicit similar breadth, with mechanisms of neutralizing antibody induction remaining unclear.
- Broadly neutralizing antibodies are also found in HIV controllers with low viral loads, challenging the necessity of high antigen exposure.
Purpose of the Study:
- To analyze B-cell receptor (BCR) repertoires in HIV controllers to identify factors associated with neutralizing antibody breadth.
- To investigate the relationship between BCR immunoglobulin gene repertoire alterations, clonal expansions, and neutralization breadth in individuals controlling HIV-1.
Main Methods:
- Analysis of paired heavy and light chain BCR repertoires from 12,591 HIV-1 envelope-specific single memory B-cells.
- Studied 22 individuals with HIV who naturally control the virus to low or undetectable plasma levels without antiretroviral therapy.
- Correlated genomic mutation frequencies in IGHV and IGLV genes with serum neutralization breadth.
Main Results:
- A direct correlation was observed between the frequency of genomic mutations in IGHV and IGLV genes and serum neutralization breadth.
- The most mutated antibody repertoires were characterized by a few large clones exhibiting evolutionary signatures of peak affinity maturation.
- These findings indicate that extensive somatic hypermutation and clonal evolution can occur even with low HIV antigen levels.
Conclusions:
- BCR selection for extended somatic hypermutation and clonal evolution can occur in HIV controllers with low antigen exposure.
- Host-specific factors, rather than solely high antigen load, may play a crucial role in developing neutralizing antibody breadth.
- These insights could guide the development of future HIV vaccine strategies targeting host-specific mechanisms.
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