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Updated: Nov 9, 2025

Analyzing and Building Nucleic Acid Structures with 3DNA
Published on: April 26, 2013
Structural Characterization of a Single-Stranded DNA-Binding Protein: A Case Study of the ORF6 Protein from
Elina Cernooka1, Janis Rumnieks1, Andris Kazaks2
1Latvian Biomedical Research and Study Centre, Riga, Latvia.
Abstract:
In the quest to understand how single-stranded DNA-binding proteins function and evolve at a molecular level, determination of their high-resolution three-dimensional structure using methods such as X-ray crystallography is indispensable. Here we present a collection of methods used in crystallographic studies of the single-stranded DNA-binding protein from the bacteriophage Enc34, from designing expression constructs through to protein production, purification, and crystallization, to determination and analysis of the protein's three-dimensional structure. The chapter aims to shed light on all the essential stages in a structural study of a single-stranded DNA-binding protein, with a spotlight on procedures specific to X-ray crystallography to aid those interested in venturing into structural biology.
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