Related Experiment Video
Updated: Nov 7, 2025

Fabrication of Zero Mode Waveguides for High Concentration Single Molecule Microscopy
Published on: May 12, 2020
Electrochemical Zero-Mode Waveguide Studies of Single Enzyme Reactions
Donghoon Han1, Seung-Ryong Kwon1, Kaiyu Fu2
1Department of Chemical and Biomolecular Engineering, University of Notre Dame, Notre Dame, IN 46556 USA.
Researchers developed electrochemical zero mode waveguides (E-ZMW) to observe single electron transfer events in redox enzymes. This technology links biological electron transfer to luminescence, enabling study of individual enzyme functions and reactive oxygen species synthesis.
Area of Science:
- Biophysical Chemistry
- Nanotechnology
- Enzyme Kinetics
Background:
- Electron transfer reactions are vital for fundamental life processes like respiration and energy metabolism.
- Understanding individual redox enzyme function is crucial for linking molecular behavior to macroscopic phenotypes.
- Current methods often average enzyme activity, obscuring single-molecule dynamics.
Purpose of the Study:
- To develop a novel technology for observing single electron transfer events in redox enzymes.
- To couple biological electron transfer reactions to luminescence for real-time monitoring.
- To investigate potential-controlled redox reactions and reactive oxygen species synthesis at the single-enzyme level.
Main Methods:
- Development of a bifunctional nanoelectrochemical-nanophotonic architecture: the electrochemical zero mode waveguide (E-ZMW).
- Utilizing E-ZMW to support potential-controlled redox reactions with single copies of glutathione reductase (GR).
- Coupling electron transfer events within the E-ZMW nanopore to luminescence detection.
Main Results:
- Demonstrated the capability of E-ZMW to monitor single electron transfer events in individual GR molecules.
- Successfully coupled redox reactions to luminescence, allowing visualization of enzyme activity at the single-molecule level.
- Extended E-ZMW functionality to observe reactive oxygen species synthesis within the ~100 zL nanopore volume.
Conclusions:
- The E-ZMW technology provides unprecedented insight into single-enzyme electron transfer dynamics.
- This approach bridges the gap between single-molecule enzyme behavior and macroscopic biological functions.
- E-ZMW opens new avenues for studying enzyme mechanisms, redox processes, and reactive species generation.
Related Concept Videos
Introduction to Enzyme Kinetics
The experimenter can then plot the initial reaction rate or velocity (Vo) of a given trial against the substrate concentration ([S]) to obtain a graph of the reaction properties. For many enzymatic reactions involving a...
Standing Waves in a Cavity
Interfacial Electrochemical Methods: Overview
Enzyme Kinetics
Scientists typically study enzyme kinetics with a fixed amount of enzyme in the controlled environment of a test tube. When more reactant, or substrate, is...
Electrochemical Gradient and Channel Proteins: An Overview
The electrical gradient: The electrical gradient across cell membranes refers to the difference in electric charge between the inside and outside of a cell. This difference drives the movement of ions towards or away from the cells. For instance, if the inside of the cell is more negatively charged relative to...

