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Updated: Nov 7, 2025

Generation of Alpha-Synuclein Preformed Fibrils from Monomers and Use In Vivo
Published on: June 2, 2019
Conformational distortion in a fibril-forming oligomer arrests alpha-Synuclein fibrillation and minimizes its toxic
Ritobrita Chakraborty1, Sandip Dey1, Pallabi Sil2
1Structural Biology and Bioinformatics Division, CSIR-Indian Institute of Chemical Biology, Kolkata, India.
Abstract:
The fibrillation pathway of alpha-Synuclein, the causative protein of Parkinson's disease, encompasses transient, heterogeneous oligomeric forms whose structural understanding and link to toxicity are not yet understood. We report that the addition of the physiologically-available small molecule heme at a sub-stoichiometric ratio to either monomeric or aggregated α-Syn, targets a His50 residue critical for fibril-formation and stabilizes the structurally-heterogeneous populations of aggregates into a minimally-toxic oligomeric state. Cryo-EM 3D reconstruction revealed a 'mace'-shaped structure of this monodisperse population of oligomers, which is comparable to a solid-state NMR Greek key-like motif (where the core residues are arranged in parallel in-register sheets with a Greek key topology at the C terminus) that forms the fundamental unit/kernel of protofilaments. Further structural analyses suggest that heme binding induces a distortion in the Greek key-like architecture of the mace oligomers, which impairs their further appending into protofilaments and fibrils. Additionally, our study reports a novel mechanism of prevention as well as reclamation of amyloid fibril formation by blocking an inter-protofilament His50 residue using a small molecule.
Insights
Heme stabilizes toxic alpha-Synuclein oligomers into a non-toxic form, revealing a novel mechanism to prevent and reverse Parkinson
Area of Science:
- Neuroscience
- Biochemistry
- Structural Biology
Background:
- Alpha-Synuclein (α-Syn) aggregation into fibrils is central to Parkinson's disease pathogenesis.
- The transient, heterogeneous oligomeric forms of α-Syn are poorly understood but implicated in toxicity.
- Targeting α-Syn oligomers offers a potential therapeutic strategy for Parkinson's disease.
Purpose of the Study:
- To investigate the structural basis of α-Syn oligomer toxicity.
- To explore the potential of small molecules to modulate α-Syn aggregation and toxicity.
- To elucidate the mechanism by which heme affects α-Syn structure and function.
Main Methods:
- Utilized cryo-electron microscopy (Cryo-EM) for 3D structural reconstruction.
- Employed solid-state nuclear magnetic resonance (ssNMR) for structural motif analysis.
- Investigated the interaction of alpha-Synuclein (α-Syn) with the small molecule heme.
Main Results:
- Heme binding to α-Syn targets His50, stabilizing oligomers into a 'mace'-shaped structure.
- This heme-bound oligomer exhibits minimal toxicity compared to native aggregates.
- The 'mace' structure, resembling a Greek key-like motif, prevents further fibril elongation.
Conclusions:
- Heme acts as a modulator, transforming toxic α-Syn oligomers into a stable, less harmful state.
- Blocking the inter-protofilament His50 residue with heme offers a novel strategy for Parkinson's disease intervention.
- This study provides insights into α-Syn structure-toxicity relationships and potential therapeutic avenues.
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07:56Utilizing Time-Resolved Protein-Induced Fluorescence Enhancement to Identify Stable Local Conformations One α-Synuclein Monomer at a Time
Published on: May 30, 2021
08:40Millisecond Hydrogen/Deuterium-Exchange Mass Spectrometry for the Study of Alpha-Synuclein Structural Dynamics Under Physiological Conditions
Published on: June 23, 2022
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