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Exploiting vulnerabilities of SWI/SNF chromatin remodelling complexes for cancer therapy
Marek Wanior1,2, Andreas Krämer1,2,3, Stefan Knapp4,5,6,7
1Institute of Pharmaceutical Chemistry, Goethe University Frankfurt, Frankfurt am Main, Germany.
Abstract:
Multi-subunit ATPase-dependent chromatin remodelling complexes SWI/SNF (switch/sucrose non-fermentable) are fundamental epigenetic regulators of gene transcription. Functional genomic studies revealed a remarkable mutation prevalence of SWI/SNF-encoding genes in 20-25% of all human cancers, frequently driving oncogenic programmes. Some SWI/SNF-mutant cancers are hypersensitive to perturbations in other SWI/SNF subunits, regulatory proteins and distinct biological pathways, often resulting in sustained anticancer effects and synthetic lethal interactions. Exploiting these vulnerabilities is a promising therapeutic strategy. Here, we review the importance of SWI/SNF chromatin remodellers in gene regulation as well as mechanisms leading to assembly defects and their role in cancer development. We will focus in particular on emerging strategies for the targeted therapy of SWI/SNF-deficient cancers using chemical probes, including proteolysis targeting chimeras, to induce synthetic lethality.
Insights
SWI/SNF chromatin remodellers are crucial for gene regulation and frequently mutated in cancer. Targeting vulnerabilities in SWI/SNF-deficient cancers offers a promising synthetic lethality therapeutic strategy.
Area of Science:
- Epigenetics and molecular biology
- Cancer genomics and therapeutics
Background:
- SWI/SNF (switch/sucrose non-fermentable) complexes are essential epigenetic regulators of gene transcription.
- Mutations in SWI/SNF-encoding genes occur in 20-25% of human cancers, often driving oncogenic processes.
- SWI/SNF-mutant cancers exhibit hypersensitivity to specific pathway perturbations, leading to synthetic lethal interactions.
Purpose of the Study:
- To review the role of SWI/SNF chromatin remodellers in gene regulation and cancer development.
- To discuss mechanisms of SWI/SNF assembly defects in oncogenesis.
- To highlight emerging targeted therapy strategies for SWI/SNF-deficient cancers.
Main Methods:
- Review of functional genomic studies and literature on SWI/SNF complexes.
- Analysis of cancer mutation prevalence and oncogenic roles of SWI/SNF.
- Exploration of synthetic lethality principles and therapeutic vulnerabilities.
Main Results:
- SWI/SNF complexes are fundamental epigenetic regulators with high mutation rates in human cancers.
- Cancer-associated SWI/SNF defects create vulnerabilities exploitable for targeted therapies.
- Synthetic lethality is a key concept for developing novel anticancer treatments.
Conclusions:
- Targeting SWI/SNF-deficient cancers via synthetic lethality is a promising therapeutic avenue.
- Emerging strategies include chemical probes and proteolysis targeting chimeras (PROTACs).
- Understanding SWI/SNF biology is critical for advancing cancer treatment.
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