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Multiple Particle Tracking Detects Changes in Brain Extracellular Matrix and Predicts Neurodevelopmental Age.
Michael McKenna1, David Shackelford1, Ceza Pontes1
1Department of Chemical Engineering, University of Washington, Seattle, Washington 98195, United States.
ACS Nano
|May 10, 2021
Summary
Multiple particle tracking (MPT) reveals how brain extracellular matrix (ECM) structure changes with age. This method accurately predicts chronological age and offers insights into neurodevelopment and injury.
Area of Science:
- Neuroscience
- Biophysics
- Materials Science
Background:
- Brain extracellular matrix (ECM) structure is crucial for neural development and function.
- Changes in ECM are implicated in neurodevelopment, neural injury, aging, and neurological diseases.
- Understanding ECM microstructure is key to deciphering these processes.
Purpose of the Study:
- To demonstrate the utility of multiple particle tracking (MPT) for probing brain ECM microstructure changes.
- To correlate ECM structural changes with chronological age in developing rats.
- To develop a predictive model for age based on ECM features.
Main Methods:
- Multiple particle tracking (MPT) of polystyrene nanoparticles in organotypic rat brain slices (age 14-70 days).
- Analysis of nanoparticle diffusion and trajectory data.
- Machine learning (boosted decision tree) model training using trajectory features.
Main Results:
- Nanoparticle diffusion in the brain extracellular space showed an inverse relationship with age.
- The distribution of effective ECM pore sizes shifted towards smaller pores during development.
- A machine learning model accurately predicted chronological age from MPT data.
Conclusions:
- MPT combined with machine learning is effective for measuring brain ECM microstructure and predicting age.
- This approach enhances understanding of ECM roles in development, aging, and injury.
- Potential for developing models to detect and quantify neural injury based on microenvironmental changes.
Keywords:
boosted decision treediffusionextracellular matrixmachine learningmicrostructureparticle tracking
