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Updated: Nov 6, 2025

Integration of Wet and Dry Bench Processes Optimizes Targeted Next-generation Sequencing of Low-quality and Low-quantity Tumor Biopsies
Published on: April 11, 2016
[Molecular pathology - the key to precision oncology]
Anders Edsjö1, Richard Palmqvist2, Felix Haglund3
1PhD, överläkare, klinisk genetik och patologi,, Skånes universitetssjukhus; Lunds universitet.
Abstract:
Rapidly expanding knowledge of the molecular landscape of cancers has resulted in the implementation of an increasing number of specific therapies targeted at tumors with specific molecular aberrations. In response to this development, new tools for predictive testing for molecular targets need to be implemented in routine health care. To achieve robust future molecular diagnostic pathology, and equal opportunity for patients to qualify for targeted therapy, the national working group for Solid Tumors in the initiative Genomic Medicine Sweden (GMS) aims to implement regional and national platforms for comprehensive genomic tumor profiling and linked analysis pipelines. Novel IT-infrastrucutures and recruitment of bioinformaticians and molecular biologists to hospital labotatories are paramount. The infrastructure will allow wider inclusion into clinical trials and supplement the national cancer registries with molecular »real world data« for research and evaluation of implemented cancer therapies and diagnostic procedures.
Insights
Genomic Medicine Sweden is establishing platforms for comprehensive genomic tumor profiling. This initiative aims to improve targeted cancer therapy and collect real-world data for research and evaluation.
Area of Science:
- Oncology
- Genomics
- Molecular Pathology
Background:
- Advances in cancer genomics reveal specific molecular targets for therapy.
- Implementing predictive testing for these targets is crucial for routine healthcare.
Purpose of the Study:
- To establish regional and national platforms for comprehensive genomic tumor profiling.
- To ensure equitable patient access to targeted cancer therapies.
Main Methods:
- Developing novel IT infrastructures for genomic data analysis.
- Recruiting bioinformaticians and molecular biologists to hospital laboratories.
- Implementing linked analysis pipelines for tumor profiling.
Main Results:
- Creation of platforms for robust molecular diagnostic pathology.
- Enhanced capacity for wider clinical trial inclusion.
- Supplementation of national cancer registries with molecular real-world data.
Conclusions:
- The initiative by Genomic Medicine Sweden (GMS) will facilitate widespread genomic tumor profiling.
- This infrastructure is essential for advancing precision oncology and evaluating treatment efficacy.
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