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Updated: Nov 5, 2025

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Microbiota Analysis Using Two-step PCR and Next-generation 16S rRNA Gene Sequencing
Published on: October 15, 2019
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Identifying background microbiomes in an evidence recovery laboratory: A preliminary study
Ana Neckovic1, Roland A H van Oorschot2, Bianca Szkuta3
1School of Life and Environmental Sciences, Deakin University, Geelong, Australia.
Summary
Forensic biology laboratories may be influenced by human microbiomes, even with cleaning. This study found participant microbes may transfer to lab surfaces, impacting forensic interpretations.
Area of Science:
- Forensic microbiology
- Microbial ecology
- Human DNA analysis
Background:
- 16S rRNA profiling shows potential for forensic identification.
- Forensic laboratories may utilize microbial profiling alongside human DNA analysis.
- Understanding background microbial signatures in forensic environments is crucial for accurate interpretation.
Purpose of the Study:
- To establish the background microbiome of an Evidence Recovery Laboratory (ERL).
- To assess microbial transfer from participants to ERL surfaces.
- To correlate microbial profiles with human DNA presence in a forensic setting.
Main Methods:
- Sampling of ERL surfaces at three timepoints: pre-cleaning, post-cleaning, and post-use.
- 16S rRNA gene sequencing for microbial profiling of ERL surfaces and human participants.
- Standard forensic STR profiling for human nuclear DNA analysis.
Main Results:
- No consistent microbial signature was found across sampled ERL items over time.
- Major bacterial phyla in ERL samples were consistent with human skin microbiomes.
- Clustering observed between participant microbiomes and ERL surfaces post-use, indicating microbial deposition.
- Human DNA was detected in ERL samples, but showed no correlation with microbial profiles.
Conclusions:
- Microbial communities may be inadvertently transferred into forensic settings over time.
- The background microbiome of a forensic laboratory can be influenced by human presence.
- Further research is needed to understand the implications of microbial transfer for forensic investigations.

